Alternatives and similar repositories for PCAtools

Users that are interested in PCAtools are comparing it to the libraries listed below

• kevinblighe / EnhancedVolcano
  Publication-ready volcano plots with enhanced colouring and labeling
  ☆438Updated last year
• raivokolde / pheatmap
  Pretty heatmaps
  ☆265Updated 2 months ago
• stemangiola / tidyHeatmap
  Draw heatmap simply using a tidy data frame
  ☆347Updated last month
• stephenslab / susieR
  R package for "sum of single effects" regression.
  ☆220Updated this week
• PhanstielLab / plotgardener
  ☆330Updated 4 months ago
• egeulgen / pathfindR
  pathfindR: Enrichment Analysis Utilizing Active Subnetworks
  ☆192Updated 3 weeks ago
• GenomicSEM / GenomicSEM
  R-package for structural equation modeling based on GWAS summary data
  ☆243Updated last week
• jespermaag / gganatogram
  Create anatograms using ggplot2
  ☆399Updated 3 weeks ago
• Yunuuuu / ggalign
  Integrative Composable Visualization Framework for ggplot2
  ☆322Updated this week
• privefl / bigsnpr
  R package for the analysis of massive SNP arrays.
  ☆210Updated last week
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆174Updated last week
• ropensci / biomartr
  Genomic Data Retrieval with R
  ☆223Updated last month
• KlausVigo / phangorn
  Phylogenetic analysis in R
  ☆208Updated 3 weeks ago
• gaospecial / ggVennDiagram
  A 'ggplot2' implement of Venn Diagram.
  ☆305Updated last month
• YinLiLin / CMplot
  📊 Circular and Rectangular Manhattan Plot
  ☆588Updated 4 months ago
• hbctraining / Intro-to-R-flipped
  ☆88Updated 3 months ago
• stemangiola / tidyseurat
  Seurat meets tidyverse. The best of both worlds.
  ☆160Updated last year
• mixOmicsTeam / mixOmics
  Development repository for the Bioconductor package 'mixOmics '
  ☆209Updated 3 months ago
• hbctraining / Intro-to-R
  ☆97Updated 4 years ago
• StoreyLab / qvalue
  R package to estimate q-values and false discovery rate quantities.
  ☆117Updated last year
• krassowski / complex-upset
  A library for creating complex UpSet plots with ggplot2 geoms
  ☆520Updated last year
• iSEE / iSEE
  R/shiny interface for interactive visualization of data in SummarizedExperiment objects
  ☆228Updated last month
• YuLab-SMU / enrichplot
  Visualization of Functional Enrichment Result
  ☆246Updated last month
• lazappi / clustree
  Visualise Clusterings at Different Resolutions
  ☆239Updated 2 months ago
• mikelove / bioc-refcard
  Bioconductor cheat sheet
  ☆191Updated last year
• hawn-lab / workshops_UW_Seattle
  ☆26Updated 4 years ago
• csdaw / ggprism
  ggplot2 extension inspired by GraphPad Prism
  ☆185Updated 3 weeks ago
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆141Updated 4 months ago
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆194Updated last year
• wilkox / gggenes
  ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2
  ☆557Updated 3 months ago