hbctraining / mainLinks
☆56Updated last week
Alternatives and similar repositories for main
Users that are interested in main are comparing it to the libraries listed below
Sorting:
- Integrated Differential Expression and Pathway analysis☆134Updated last month
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- Simplify functional enrichment results☆121Updated last year
- Tutorial for AMSI BioInfoSummer 2018☆30Updated 7 years ago
- DNA methylation analysis notes from Ming Tang☆92Updated 6 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated 2 months ago
- ☆63Updated last year
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 5 months ago
- My youtube programming scripts☆59Updated 11 months ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated 2 years ago
- RNA-Seq analysis workflow☆105Updated 4 years ago
- RNA-seq data analysis practical☆60Updated 11 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆94Updated 8 years ago
- Create KEGG.db Package☆64Updated 2 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- Assignment of known mutational signatures to individual samples and individual somatic mutations☆70Updated 3 weeks ago
- Tutorials on accessing public reference and genomic data☆30Updated 10 months ago
- An R interface to the MEME Suite☆54Updated 6 months ago
- A toolkit for QC and visualization of ATAC-seq results.☆72Updated 11 months ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆83Updated 11 months ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated last year
- The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/☆101Updated 3 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆120Updated 3 weeks ago
- published papers with a lot of data☆74Updated 8 months ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated last week
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- An R interface to enrichR☆93Updated 10 months ago