☆57Mar 2, 2026Updated 2 weeks ago
Alternatives and similar repositories for main
Users that are interested in main are comparing it to the libraries listed below
Sorting:
- ☆445Jun 15, 2020Updated 5 years ago
- Notes on ChIP-seq and other-seq-related tools☆26Feb 6, 2026Updated last month
- My Self-Study Room: keep tidy and lightweight☆30Apr 25, 2024Updated last year
- Notes in markdown for clinical medicine (mainly in Chinese)☆14Mar 6, 2026Updated 2 weeks ago
- Validating glioblastoma immune cell immunohistochemsitry using computational deconvolution of TCGA tumors☆14Jul 10, 2019Updated 6 years ago
- ☆408Jan 13, 2022Updated 4 years ago
- Scripts and files for the annual Short Read Analysis Workshop☆12Mar 6, 2026Updated 2 weeks ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Feb 22, 2022Updated 4 years ago
- Useful tools for working with Salmon output☆38Jun 24, 2020Updated 5 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆27Oct 11, 2025Updated 5 months ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆18Jan 19, 2026Updated 2 months ago
- ☆29Apr 20, 2019Updated 6 years ago
- Collection of bioinformatics training materials☆17Aug 18, 2022Updated 3 years ago
- An Interactive Consensus Clustering framework for Cross-platform data analysis☆14Jan 28, 2022Updated 4 years ago
- Differential Hi-C Data Analysis Workshop https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.76☆15Apr 10, 2021Updated 4 years ago
- Analysis and Visualization of Ribosome Profiling Data☆31Aug 29, 2025Updated 6 months ago
- Assorted ML tutorials that I originally wrote for Decoding Biology☆13Aug 18, 2024Updated last year
- 极客R:数据分析之道☆25Aug 12, 2020Updated 5 years ago
- Quickly switch to a new numbered workspace. Utility for the i3 window manager.☆12Sep 8, 2021Updated 4 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- ☆18Aug 19, 2019Updated 6 years ago
- Griffith lab research website☆17Nov 29, 2025Updated 3 months ago
- ☆93Mar 12, 2026Updated last week
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆25Jul 21, 2021Updated 4 years ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Mar 1, 2019Updated 7 years ago
- Web-site for the 2020 CRUK CC Bioinformatics Summer School (Held virtually)☆24Mar 4, 2021Updated 5 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Aug 6, 2019Updated 6 years ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.☆14Nov 29, 2013Updated 12 years ago
- Intro to ChIPseq using HPC☆321Jan 30, 2023Updated 3 years ago
- RNAseq analysis in R workshop, originally taught: http://combine-australia.github.io/2016-05-11-RNAseq/☆24Dec 1, 2020Updated 5 years ago
- workshop website on readthedocs☆21Sep 26, 2025Updated 5 months ago
- A simple gene co-expression analyses workflow powered by tidyverse and graph analyses☆213Sep 3, 2025Updated 6 months ago
- Tutorial for AMSI BioInfoSummer 2018☆29Dec 3, 2018Updated 7 years ago
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆24Mar 28, 2022Updated 3 years ago
- This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioCond…☆13Jan 25, 2016Updated 10 years ago
- Shiny GUI application for genomics meta-analysis☆22Nov 4, 2020Updated 5 years ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆51Jan 18, 2023Updated 3 years ago
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Apr 11, 2023Updated 2 years ago
- PAGAN2 multiple sequence aligner☆12Jul 2, 2024Updated last year