Short course describing the considerations for a successful RNA-seq experiment
☆19Jan 13, 2022Updated 4 years ago
Alternatives and similar repositories for rnaseq_overview
Users that are interested in rnaseq_overview are comparing it to the libraries listed below
Sorting:
- Identifying ViRal and Circular content in metAgenomes☆14Dec 13, 2018Updated 7 years ago
- Simulate mutations in genomes☆15Jun 15, 2020Updated 5 years ago
- CAMITAX: Taxon labels for microbial genomes☆31Dec 14, 2023Updated 2 years ago
- Desktop tool for microbial genome annotation and gene detection☆13Jun 22, 2021Updated 4 years ago
- 介紹如何使用R完成資料讀取、處理、分析與呈現，以及大數據技術與R的整合☆17Nov 19, 2020Updated 5 years ago
- EPIDEMIC is an easy-to-run Matlab/Octave educational toolkit for epidemiological analysis.☆17Apr 4, 2025Updated 11 months ago
- ☆97Mar 23, 2021Updated 4 years ago
- ☆408Jan 13, 2022Updated 4 years ago
- Fast RNAseq pipeline☆10Mar 17, 2023Updated 3 years ago
- Tutorials on accessing public reference and genomic data☆32Feb 18, 2025Updated last year
- NGS-1 Data analysis course☆38Jul 8, 2021Updated 4 years ago
- A streamlined workflow and GUI for real-time species identification and pathogen characterization via nanopore sequencing data. Engineere…☆20Oct 4, 2024Updated last year
- Code for detecting genomic island insertions in clades of microbes.☆19Sep 14, 2023Updated 2 years ago
- A Nextflow implementation of the Tuxedo Suite of Tools: HISAT, StringTie & Ballgown☆10Apr 2, 2018Updated 7 years ago
- Generating polygenic risk scores in UK Biobank (University of Bristol)☆16Aug 14, 2020Updated 5 years ago
- A light-weight HTML lab notebook generator☆18Jun 16, 2023Updated 2 years ago
- RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketches☆53Updated this week
- Introduction to the Unix shell☆19Mar 23, 2021Updated 4 years ago
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆11Feb 27, 2026Updated 3 weeks ago
- Multi-modality brain-age analysis in the UK Biobank☆12Mar 4, 2020Updated 6 years ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆28Feb 12, 2026Updated last month
- Course materials for An Introduction to Machine Learning 2019☆16Oct 1, 2019Updated 6 years ago
- Helper functions for UK Biobank data☆12Dec 6, 2021Updated 4 years ago
- ☆73Jan 13, 2022Updated 4 years ago
- ☆13Sep 22, 2017Updated 8 years ago
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆173Mar 23, 2021Updated 4 years ago
- The set of NGS processing pipelines used at Babraham☆17Feb 11, 2026Updated last month
- An introduction to matrix factorization and PCA and SVD.☆41Sep 28, 2023Updated 2 years ago
- useful functions for ggplot☆18Jul 16, 2025Updated 8 months ago
- Patient-Specific Modeling in Python☆19Updated this week
- Notes and code for running UK Biobank GWAS at the MRC IEU☆18Jul 18, 2024Updated last year
- ☆16Jun 21, 2023Updated 2 years ago
- Bacterial Genome Assembly and Assessment☆26Nov 21, 2025Updated 4 months ago
- panISa is a software to search insertion sequence (IS) on resequencing data (bam file)☆24Apr 11, 2024Updated last year
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated last month
- Fast, accurate taxonomic assignments for the human vaginal microbiota☆11Feb 11, 2026Updated last month
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆43Jul 12, 2021Updated 4 years ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆33Nov 28, 2023Updated 2 years ago
- ☆13Sep 20, 2024Updated last year