nasqar / ClusterProfShinyORALinks
A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries
☆13Updated 5 years ago
Alternatives and similar repositories for ClusterProfShinyORA
Users that are interested in ClusterProfShinyORA are comparing it to the libraries listed below
Sorting:
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated 2 months ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆18Updated 5 years ago
- Comprehensive Human Expressed SequenceS☆17Updated this week
- Explore the cancer relevance of your gene list☆51Updated 4 months ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- interactive plots for differential expression analysis☆32Updated 3 weeks ago
- Accompanying analysis code for the FRASER manuscript☆26Updated 4 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆14Updated last week
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- Published at Bioinformatics☆12Updated last year
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- Code for EpiMap data browser☆14Updated last year
- ☆27Updated 2 years ago
- ☆17Updated last year
- Mean Alterations Using Discrete Expression☆14Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆18Updated last year
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆28Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated last year
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆29Updated 6 years ago
- Code to run OncoSig Analyses☆18Updated 4 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 8 months ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆29Updated 6 years ago
- iread☆25Updated 4 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 3 months ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated 7 months ago