Alternatives and similar repositories for ClusterProfShinyORA

Users that are interested in ClusterProfShinyORA are comparing it to the libraries listed below

• nasqar / ClusterProfShinyGSEA
  A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
  ☆18Updated 5 years ago
• yigbt / multiGSEA
  The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.
  ☆18Updated last month
• benoukraflab / TFregulomeR-old
  TFregulomeR reveals transcription factors’ context-specific features and functions
  ☆16Updated 3 years ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 4 years ago
• mritchielab / GlimmaV2
  interactive plots for differential expression analysis
  ☆32Updated 2 months ago
• hase62 / Neoantimon
  Published at Bioinformatics
  ☆12Updated 11 months ago
• ashleymaeconard / TIMEOR
  TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R
  ☆16Updated 3 years ago
• flemingtonlab / SpliceTools
  ☆17Updated 10 months ago
• cboix / epimap_vis
  Code for EpiMap data browser
  ☆14Updated last year
• szenitha / Shiny-Seq
  Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data
  ☆16Updated 7 years ago
• ChrisMaherLab / PACT
  ☆9Updated last year
• chess-genome / chess
  Comprehensive Human Expressed SequenceS
  ☆17Updated 10 months ago
• mhalushka / miRge
  miRge - microRNA alignment software for small RNA-seq data, now at v2.0
  ☆27Updated 3 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆51Updated 3 months ago
• khuranalab / CompositeDriver
  Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers
  ☆15Updated 6 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆23Updated 4 years ago
• ELELAB / MoonlightR
  ☆17Updated last year
• RausellLab / CNVxplorer
  A webtool for the clinical interpretation of CNVs in rare disease patients
  ☆12Updated 2 years ago
• SimoneTiberi / BANDITS
  BANDITS: Bayesian ANalysis of DIfferenTial Splicing
  ☆17Updated last year
• genemine / iread
  iread
  ☆24Updated 3 years ago
• datapplab / SBGNview
  ☆27Updated 2 years ago
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆19Updated 2 years ago
• califano-lab / OncoSig
  Code to run OncoSig Analyses
  ☆18Updated 4 years ago
• Dowell-Lab / DAStk
  Differential ATAC-seq toolkit
  ☆27Updated last year
• kuijjerlab / PySNAIL
  Smooth-quantile Normalization Adaptation for Inference of co-expression Links
  ☆16Updated 2 years ago
• deeptools / docker-galaxy-hicexplorer
  Galaxy Docker Image for the HiCExplorer
  ☆10Updated 6 years ago
• jiujiezz / tsnad
  Detecting somatic mutations and predicting tumor-specific neo-antigens
  ☆28Updated 3 years ago
• researchapps / polysolver
  Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I (…
  ☆13Updated 8 years ago
• yasinkaymaz / singleCellRNAseq_workshop
  Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.
  ☆16Updated 6 years ago
• mozack / vdjer
  V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data
  ☆29Updated 2 years ago