☆60Sep 24, 2026Updated 2 weeks ago
Alternatives and similar repositories for Shell-for-bioinformatics
Users that are interested in Shell-for-bioinformatics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆94Aug 26, 2026Updated last month
- Introduction to bulk RNA-seq☆152Mar 16, 2026Updated 6 months ago
- ☆101Mar 16, 2026Updated 6 months ago
- ☆14Apr 15, 2026Updated 5 months ago
- ☆225May 28, 2026Updated 4 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Six hour hands-on to creating publication-quality plots in R☆44Mar 20, 2026Updated 6 months ago
- ☆10Dec 10, 2021Updated 4 years ago
- ☆36May 28, 2026Updated 4 months ago
- ☆672Aug 20, 2026Updated last month
- Analysis and Visualization of Ribosome Profiling Data☆32Aug 29, 2025Updated last year
- Materials for short, half-day workshops☆366Jul 22, 2026Updated 2 months ago
- SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualiz…☆13Feb 5, 2025Updated last year
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆20Aug 9, 2023Updated 3 years ago
- ☆11Apr 6, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Detection of differential translated genes using Ribo-seq☆17Apr 10, 2021Updated 5 years ago
- Advanced steps of the OSCA book☆17Aug 26, 2026Updated last month
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago
- Tutorials on accessing public reference and genomic data☆32Mar 20, 2026Updated 6 months ago
- Project Organization and Management for Genomics☆26Updated this week
- Building on material from Introduction to Single Cell RNA-Seq, this workshop aims to cover advanced topics, including TCR and trajectory …☆15Apr 12, 2023Updated 3 years ago
- ☆414Jan 13, 2022Updated 4 years ago
- An R package for finding non-adenosine residues in poly(A) tails of ONT direct RNA sequencing reads☆16Sep 26, 2026Updated last week
- Hands-on workflow for learning metagenomics including DNA mapping, binning, QC and annotation. Answers and example code available in the…☆16Mar 25, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Introduction to Cloud Computing for Genomics☆21Sep 29, 2026Updated last week
- Support EMCRs to develop their computing skills☆13Jun 21, 2026Updated 3 months ago
- R functions related to pedigrees☆14Sep 29, 2025Updated last year
- release version☆62Jul 29, 2022Updated 4 years ago
- ☆15Oct 11, 2019Updated 6 years ago
- ☆59Oct 2, 2026Updated last week
- Repository of common bioinformatics scripts☆39Sep 21, 2021Updated 5 years ago
- Practical course on running jobs on a HPC☆21Updated this week
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆19Nov 13, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A Bioconductor package to retrieve and analyze data from the Human Protein Atlas☆39Aug 8, 2026Updated 2 months ago
- Read contamination removal☆24Jan 24, 2024Updated 2 years ago
- AIDA phase 1 splicing QTL paper☆16Feb 17, 2026Updated 7 months ago
- Visualisation application for Klebsiella genotypes generated by Kleborate.☆10Mar 10, 2026Updated 7 months ago
- Notebooks to illustrate how BigFISH is working.☆12Sep 5, 2022Updated 4 years ago
- An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq☆42Mar 20, 2026Updated 6 months ago
- Doing sql in notebooks.☆15Aug 14, 2023Updated 3 years ago