jafetgado / PyCanalLinks
Conservation analysis of homologous proteins with Python
☆11Updated 3 years ago
Alternatives and similar repositories for PyCanal
Users that are interested in PyCanal are comparing it to the libraries listed below
Sorting:
- Feature map and function annotation of Proteins☆33Updated 11 months ago
- Mutation effects predicted from sequence co-variation☆65Updated 7 years ago
- Python framework for doing ancestral sequence reconstruction☆38Updated 10 months ago
- Multi-class signal peptide prediction and structure decoding model.☆85Updated 4 months ago
- Software for predicting translation initiation rates in bacteria☆24Updated 6 months ago
- Evolutionary conservation estimation of residues or nucleotides☆42Updated 3 years ago
- Transmembrane proteins predicted through Language Model embeddings☆36Updated 3 weeks ago
- A domain parser for Alphafold models☆38Updated last year
- Fast protein domain structure embedding+search tool☆21Updated 2 weeks ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆88Updated last year
- snakemake pipeline for creating trees from sequence sets☆79Updated 2 weeks ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆46Updated 5 years ago
- ☆11Updated 5 months ago
- ☆20Updated 2 years ago
- DeepECtransformer☆24Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated 2 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Updated 2 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆72Updated last month
- A method to predict DNA shape features considering farther flanking region.☆31Updated 8 months ago
- UniProt Id Mapping through API☆32Updated 8 months ago
- ☆30Updated last year
- Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.☆38Updated 5 months ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 2 years ago
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆106Updated 9 months ago
- Models, design algorithms, and other software related to Salis lab publications☆32Updated 7 months ago
- Detection of remote homology by comparison of protein language model representations☆53Updated 5 months ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆16Updated 2 years ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆36Updated 9 months ago