Alternatives and similar repositories for PyCanal

Users that are interested in PyCanal are comparing it to the libraries listed below

• idrblab / AnnoPRO
  Feature map and function annotation of Proteins
  ☆33Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆47Updated 3 years ago
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆25Updated 2 weeks ago
• fteufel / signalp-6.0
  Multi-class signal peptide prediction and structure decoding model.
  ☆95Updated 8 months ago
• harmslab / topiary
  Python framework for doing ancestral sequence reconstruction
  ☆41Updated last year
• BernhoferM / TMbed
  Transmembrane proteins predicted through Language Model embeddings
  ☆39Updated 2 months ago
• EngqvistLab / Tome
  A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima
  ☆61Updated 5 years ago
• DessimozLab / fold_tree
  snakemake pipeline for creating trees from sequence sets
  ☆86Updated 2 weeks ago
• kaistsystemsbiology / DeepProZyme
  DeepECtransformer
  ☆28Updated last year
• ml4bio / Dense-Homolog-Retrieval
  Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
  ☆120Updated last year
• idptools / sparrow
  Next generation sequence parameter library for proteins
  ☆35Updated 3 weeks ago
• prehensilecode / alphafold_singularity
  Singularity recipe for AlphaFold
  ☆36Updated 10 months ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆69Updated 8 years ago
• Merck / bgc-pipeline
  ☆11Updated 10 months ago
• hsalis / SalisLabCode
  Models, design algorithms, and other software related to Salis lab publications
  ☆35Updated 11 months ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆75Updated 2 months ago
• davidhoover / DNAWorks
  Automatic oligonucleotide design for PCR-based gene synthesis
  ☆47Updated 6 years ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆40Updated last year
• wrf / pdbcolor
  Python code to color a PDB structure based on parameters from a multiple sequence alignment
  ☆32Updated 2 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆73Updated last month
• MicroResearchLab / AMP-potency-prediction-EvoGradient
  A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…
  ☆35Updated 2 months ago
• moshi4 / pyMSAviz
  MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
  ☆154Updated 10 months ago
• steineggerlab / foldmason
  Multiple Protein Structure Alignment at Scale with FoldMason
  ☆190Updated this week
• y-hwang / gLM
  Genomic language model predicts protein co-regulation and function
  ☆81Updated 6 months ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆60Updated 2 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 6 months ago
• cansyl / ECPred
  ☆17Updated 3 years ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆31Updated 2 years ago
• esbgkannan / kibby
  A fast, alignment-free method for estimating sequence conservation using protein sequence embedding
  ☆17Updated 2 years ago