Functional-Metabolomics-Lab / FBMN-STATSLinks
FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
☆39Updated last month
Alternatives and similar repositories for FBMN-STATS
Users that are interested in FBMN-STATS are comparing it to the libraries listed below
Sorting:
- MS2Query - machine learning assisted library querying of MS/MS spectra☆45Updated 2 months ago
- Public Workflows at GNPS☆62Updated last year
- asari, metabolomics data preprocessing☆51Updated this week
- Metabolome Annotation Workflow☆25Updated last year
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆46Updated last year
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆53Updated last month
- Democratizing ML in proteomics☆39Updated last week
- Deep learning framework for proteomics☆129Updated 3 weeks ago
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆21Updated 4 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆29Updated 7 months ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Updated 2 years ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆89Updated last year
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆28Updated this week
- Python package for investigating the structural context of PTMs☆28Updated 6 months ago
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆110Updated last week
- ☆55Updated 4 years ago
- A list of tools on proteomics using deep learning☆97Updated last year
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆83Updated 4 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆68Updated 3 weeks ago
- Transformer deep learning model for de novo sequencing of data-independent acquisition mass spectrometry data☆22Updated 5 months ago
- A collection of available Python tools for Proteomics analysis☆58Updated 6 years ago
- ☆62Updated last year
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆44Updated 4 months ago
- Community-curated tutorials and datasets for ML in proteomics☆54Updated 4 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆47Updated 5 months ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆14Updated 11 months ago
- a python package for molecular formula analysis in MS-based small molecule studies☆28Updated 3 weeks ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆51Updated last week
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆27Updated last month
- R package for optimized LC-MS spectra processing☆25Updated this week