High level functionality to support and simplify metabolomics data annotation.
☆21Aug 5, 2026Updated 2 months ago
Alternatives and similar repositories for MetaboAnnotation
Users that are interested in MetaboAnnotation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆33Aug 3, 2024Updated 2 years ago
- Low level infrastructure to handle MS spectra☆48Sep 14, 2026Updated 3 weeks ago
- R Interface to the Metabolights REST API☆11Jun 10, 2026Updated 4 months ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Updated this week
- data processing for MS-based metabolomics☆15May 28, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 8 years ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆33Mar 23, 2021Updated 5 years ago
- Rocker image for metabolomics data analysis☆14Oct 25, 2025Updated 11 months ago
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 4 years ago
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- R Interface to the ClassyFire REST API☆15Aug 21, 2026Updated last month
- Interfacing R's Spectra package with the Python world.☆13May 12, 2026Updated 5 months ago
- Set of Galaxy tool wrappers developed at RECETOX☆15Updated this week
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Apr 25, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Realtime quality control for mass spectrometry data acquisition☆22May 19, 2026Updated 4 months ago
- ⚠️ Moved to https://github.com/lotus-initiative☆11Oct 2, 2026Updated last week
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Feb 28, 2026Updated 7 months ago
- QC systems for metabolomics studies☆11Updated this week
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆15Sep 11, 2026Updated last month
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆22Aug 7, 2024Updated 2 years ago
- Creating and using (chemical) compound databases☆19Mar 19, 2026Updated 6 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆29May 22, 2026Updated 4 months ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 8 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆28Nov 30, 2023Updated 2 years ago
- R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…☆11Apr 16, 2026Updated 5 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆98Jun 3, 2026Updated 4 months ago
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆19Sep 15, 2026Updated 3 weeks ago
- Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis☆12Updated this week
- Galaxy tools for metabolomics maintained by Workflow4Metabolomics☆34Sep 8, 2026Updated last month
- Public Workflows at GNPS☆69Jan 30, 2024Updated 2 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆11Sep 6, 2022Updated 4 years ago
- Interactive software to analyze and browse mass spectrometry data☆21Jul 3, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- TopPIC suite is a software suite for proteoform identification by top-down mass spectrometry.☆16Sep 27, 2026Updated 2 weeks ago
- On-instrument and post-acquisition targeted feature extraction☆13Updated this week
- Maven GUI: Metabolomics Analysis and Visualization Engine☆22Updated this week
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆20Jan 24, 2024Updated 2 years ago
- Create .mzML files through the R Console☆12Jun 14, 2026Updated 3 months ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆49Updated this week
- Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.☆273Updated this week