High level functionality to support and simplify metabolomics data annotation.
☆20Mar 19, 2026Updated last month
Alternatives and similar repositories for MetaboAnnotation
Users that are interested in MetaboAnnotation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆33Aug 3, 2024Updated last year
- Low level infrastructure to handle MS spectra☆46Apr 8, 2026Updated 3 weeks ago
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 8 months ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Jun 3, 2025Updated 11 months ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 5 years ago
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 6 months ago
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- R Interface to the ClassyFire REST API☆14Updated this week
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆14Apr 13, 2026Updated 2 weeks ago
- Set of Galaxy tool wrappers developed at RECETOX☆14Apr 24, 2026Updated last week
- A collection of awesome lipidomics tools and resources☆17Jun 23, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Realtime quality control for mass spectrometry data acquisition☆21Apr 21, 2026Updated last week
- ☆11Updated this week
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Feb 28, 2026Updated 2 months ago
- QC systems for metabolomics studies☆11Sep 17, 2025Updated 7 months ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Apr 25, 2023Updated 3 years ago
- Creating and using (chemical) compound databases☆19Mar 19, 2026Updated last month
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆22Aug 7, 2024Updated last year
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 3 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆29Jun 4, 2025Updated 10 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆28Nov 30, 2023Updated 2 years ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆95Mar 18, 2026Updated last month
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆19May 12, 2023Updated 2 years ago
- ☆46Mar 14, 2025Updated last year
- Interfacing R's Spectra package with the Python world.☆13Apr 24, 2026Updated last week
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Sep 6, 2022Updated 3 years ago
- ☆15Nov 7, 2024Updated last year
- TopPIC suite is a software suite for proteoform identification by top-down mass spectrometry.☆14Mar 10, 2026Updated last month
- Interactive software to analyze and browse mass spectrometry data☆21Jul 3, 2025Updated 10 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Create .mzML files through the R Console☆12Aug 27, 2025Updated 8 months ago
- Maven GUI: Metabolomics Analysis and Visualization Engine☆22Apr 22, 2026Updated last week
- Public Workflows at GNPS☆65Jan 30, 2024Updated 2 years ago
- On-instrument and post-acquisition targeted feature extraction☆13Apr 24, 2026Updated last week
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆20Jan 24, 2024Updated 2 years ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Apr 22, 2026Updated last week
- Galaxy tools for metabolomics maintained by Workflow4Metabolomics☆33Jan 20, 2026Updated 3 months ago