Alternatives and similar repositories for MetaboAnnotation

Users that are interested in MetaboAnnotation are comparing it to the libraries listed below

• yguitton / metaMS
  data processing for MS-based metabolomics
  ☆15Updated last year
• aberHRML / metabolighteR
  R Interface to the Metabolights REST API
  ☆11Updated 4 months ago
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆11Updated 3 months ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆16Updated 8 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• yufree / xcmsrocker
  Rocker image for metabolomics data analysis
  ☆13Updated 2 months ago
• mjhelf / Metaboseek
  Interactive software to analyze and browse mass spectrometry data
  ☆21Updated 6 months ago
• hhabra / metabCombiner
  metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation
  ☆13Updated last year
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆17Updated 3 weeks ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆30Updated last year
• eMetaboHUB / MS-CleanR
  ☆27Updated 2 years ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆13Updated 3 weeks ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆30Updated last year
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆11Updated 8 months ago
• aberHRML / classyfireR
  R Interface to the ClassyFire REST API
  ☆12Updated 10 months ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆13Updated 2 months ago
• wilsontom / msconverteR
  Create .mzML files through the R Console
  ☆12Updated 4 months ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• dgrapov / CTSgetR
  R interface to Chemical Translation Service (CTS)
  ☆17Updated last year
• rformassspectrometry / Spectra
  Low level infrastructure to handle MS spectra
  ☆43Updated 3 weeks ago
• ODonnell-Lipidomics / LipidFinder
  LipidFinder: A computational workflow for discovery of new lipid molecular species
  ☆21Updated 4 years ago
• lifs-tools / goslin
  Goslin is the Grammar on succinct lipid nomenclature.
  ☆12Updated last month
• kruvelab / MS2Tox
  MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS
  ☆16Updated this week
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆15Updated 2 years ago
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆35Updated 4 years ago
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆10Updated last month
• KujawinskiLaboratory / Autotuner
  This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…
  ☆16Updated 4 years ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆26Updated 2 weeks ago
• jorainer / SpectraTutorials
  These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…
  ☆21Updated last year