Alternatives and similar repositories for pyOpenMS_UmetaFlow

Users that are interested in pyOpenMS_UmetaFlow are comparing it to the libraries listed below

• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆15Updated 6 months ago
• XiminHu / mass-suite
  ☆26Updated last year
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆45Updated last month
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆49Updated 3 months ago
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆29Updated last month
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• fermo-metabolomics / FERMO
  Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.
  ☆32Updated last month
• pnnl / deimos
  ☆34Updated 3 weeks ago
• biorack / simile
  ☆16Updated 2 years ago
• ipb-halle / MetFragRelaunched
  Relaunch of the initial MetFrag project.
  ☆18Updated last week
• Functional-Metabolomics-Lab / FBMN-STATS
  FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
  ☆38Updated this week
• mandelbrot-project / memo
  Ms2 basEd saMple vectOrization (memo) package
  ☆17Updated 2 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆27Updated 4 months ago
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆55Updated 11 months ago
• computational-metabolomics / dimspy
  Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
  ☆20Updated last year
• pnnl / MSAC
  ☆23Updated 3 months ago
• Philipbear / BUDDY_Metabolomics
  Molecular formula discovery via bottom-up MS/MS interrogation
  ☆13Updated 9 months ago
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆24Updated 2 months ago
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆18Updated 8 months ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated 6 months ago
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆31Updated 2 years ago
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆18Updated 2 years ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆50Updated last week
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆15Updated 8 years ago
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆29Updated 3 months ago