biosustain / pyOpenMS_UmetaFlow
Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
☆18Updated 2 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for pyOpenMS_UmetaFlow
- Metabolome Annotation Workflow☆25Updated 8 months ago
- ☆19Updated last year
- ☆22Updated 9 months ago
- ☆22Updated last year
- Streamlining Mass Spectrometry Data Visualization with Pandas☆10Updated 3 weeks ago
- ☆14Updated 6 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆40Updated 2 months ago
- ☆25Updated 11 months ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 3 years ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆38Updated last week
- A small library to provide peak picking for software processing mass spectrometry data☆20Updated 2 months ago
- CANOPUS visualization for Jupyter notebook☆20Updated 2 years ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆26Updated this week
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆17Updated last year
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 6 months ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆19Updated last year
- Ms2 basEd saMple vectOrization (memo) package☆17Updated last year
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆29Updated 2 months ago
- Spectral entropy for mass spectrometry data.☆25Updated 2 weeks ago
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆29Updated last month
- ☆16Updated 2 years ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆13Updated last year
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆38Updated 4 months ago
- Relaunch of the initial MetFrag project.☆17Updated last week
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last year
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆14Updated 7 years ago
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆32Updated last month
- TidyMS: Tools for working with MS data in untargeted metabolomics☆53Updated 4 months ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 2 months ago
- ☆33Updated 5 months ago