Alternatives and similar repositories for readthedocs

Users that are interested in readthedocs are comparing it to the libraries listed below

• bigdatagenomics / mango
  A scalable genome browser. Apache 2 licensed.
  ☆125Updated 2 years ago
• verilylifesciences / variant-qc
  Quality control methods for human genomic variants.
  ☆62Updated 2 years ago
• nfergu / popstrat
  Population Stratification Analysis on Genomics Data Using Deep Learning
  ☆26Updated 8 years ago
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆98Updated 7 years ago
• ga4gh / ga4gh-schemas
  Models and APIs for Genomic data. RETIRED 2018-01-24
  ☆218Updated 2 years ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• Intel-HLS / GenomicsDB
  GenomicsDB
  ☆111Updated 2 years ago
• HadoopGenomics / Hadoop-BAM
  Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework
  ☆72Updated 2 years ago
• konradjk / exac_browser
  Browser for ExAC consortium data
  ☆106Updated 3 years ago
• amplab / snap
  Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data
  ☆293Updated last month
• chapmanb / cloudbiolinux
  CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
  ☆257Updated last year
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• bigdatagenomics / avocado
  A Variant Caller, Distributed. Apache 2 licensed.
  ☆71Updated 6 years ago
• broadgsa / gatk
  Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk…
  ☆295Updated 7 years ago
• broadgsa / gatk-protected
  Official code repository for GATK versions 1.0 through 3.7 (full licensed package). For GATK 4 code, see the https://github.com/broadinst…
  ☆143Updated 7 years ago
• isb-cgc / examples-Python
  Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.
  ☆54Updated 6 years ago
• KHP-Informatics / ngseasy
  Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)
  ☆86Updated 8 years ago
• YeoLab / flotilla
  Reproducible machine learning analysis of gene expression and alternative splicing data
  ☆126Updated 2 years ago
• bigdatagenomics / eggo
  Ready-to-go Parquet-formatted public 'omics datasets
  ☆30Updated 9 years ago
• rabix / bunny
  [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0
  ☆74Updated 4 years ago
• wurmlab / oswitch
  Provides access to complex Bioinformatics software (even BioLinux!) in just one command.
  ☆76Updated 8 years ago
• arq5x / gemini
  a lightweight db framework for exploring genetic variation.
  ☆323Updated 5 years ago
• googlegenomics / pipelines-api-examples
  Examples for the Google Genomics Pipelines API.
  ☆50Updated 7 years ago
• ga4gh / mme-apis
  Documentation for the MatchmakerExchange APIs
  ☆33Updated last year
• dasmoth / dalliance
  Interactive web-based genome browser.
  ☆227Updated 6 years ago
• ncbi / ngs
  NGS Language Bindings
  ☆119Updated last year
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• macarthur-lab / clinvar
  This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file…
  ☆126Updated 5 years ago
• kingsfordgroup / sailfish
  Rapid Mapping-based Isoform Quantification from RNA-Seq Reads
  ☆126Updated 3 years ago
• verilylifesciences / genomewarp
  GenomeWarp translates genetic variants from one genome assembly version to another.
  ☆97Updated 2 years ago