Documentation for the Google Genomics cookbook.
☆143May 20, 2020Updated 6 years ago
Alternatives and similar repositories for readthedocs
Users that are interested in readthedocs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Examples of how to get started with genomics data in BigQuery in many languages.☆53Jun 9, 2017Updated 9 years ago
- Quality control methods for human genomic variants.☆61Sep 1, 2022Updated 3 years ago
- A Variant Caller, Distributed. Apache 2 licensed.☆72Mar 11, 2019Updated 7 years ago
- [DEPRECATED] An R package for Google Genomics API queries.☆46Mar 15, 2023Updated 3 years ago
- This Is Indian Country - Spring 2018 Instance☆12Apr 30, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Tools for participants in the ICGC-TCGA DREAM Mutation Calling challenge☆15Dec 10, 2015Updated 10 years ago
- A method for identifying deleterious protein variation.☆11Nov 14, 2016Updated 9 years ago
- BioDSL (pronounced Biodiesel) is a Domain Specific Language for creating bioinformatic analysis workflows.☆16Jul 30, 2018Updated 7 years ago
- Benchmarking toolkit for variant calling☆48Oct 13, 2020Updated 5 years ago
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Apr 13, 2018Updated 8 years ago
- viral-ngs: command line tools and wrappers for processing raw viral genomic data☆196Jun 22, 2026Updated last week
- Apache Spark jobs such as Principal Coordinate Analysis.☆77Jan 30, 2017Updated 9 years ago
- Utility functions to extend and optimize GenomicRanges functionality.☆10Jun 4, 2026Updated 3 weeks ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Introduction to the Command Line for Genomics☆70Updated this week
- Best practices for readable, sharable, and verifiable R code☆18Mar 26, 2019Updated 7 years ago
- Efficient base quality score recalibrator for NGS data☆24Nov 28, 2015Updated 10 years ago
- Chromatin contact paired-read single-cell Hi-C processing module for Nuc3D and NucTools☆15Sep 15, 2025Updated 9 months ago
- The first CHM1 paper (Li, 2014)☆25Jul 9, 2014Updated 11 years ago
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 11 years ago
- Color DNA/RNA bases in terminal output☆21Aug 29, 2017Updated 8 years ago
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- ☆26May 16, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.☆559May 15, 2025Updated last year
- Deprecated☆101Aug 12, 2019Updated 6 years ago
- Fast and memory-efficient sequencing error corrector☆94Jan 4, 2026Updated 5 months ago
- Official code repository for GATK versions 1.0 through 3.7 (full licensed package). For GATK 4 code, see the https://github.com/broadinst…☆147Aug 22, 2018Updated 7 years ago
- A Python workflow to study protein-protein coevolution and interaction☆21Jun 30, 2017Updated 8 years ago
- reference free variant assembly☆34Jul 14, 2023Updated 2 years ago
- FM-index representation of a de Bruijn graph☆26Aug 7, 2017Updated 8 years ago
- RTG Core: Software for alignment and analysis of next-gen sequencing data.☆49May 27, 2025Updated last year
- Models and APIs for Genomic data. RETIRED 2018-01-24☆222Oct 28, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Filtering and profiling of next-generational sequencing data using region-specific rules☆25May 17, 2016Updated 10 years ago
- NGS Language Bindings☆123Dec 6, 2023Updated 2 years ago
- Toolkit for extracting SVs from long sequences and benchmarking variant callers☆13Jan 10, 2017Updated 9 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- R package for visualizing complex and multi-track 1D and 2D genomic data in GenomicRanges framework☆18May 10, 2026Updated last month
- a pileup library that embraces the huge☆43Oct 2, 2020Updated 5 years ago
- de Bruijn Graph-based read aligner☆36Sep 3, 2018Updated 7 years ago