JEFworks-Lab / R-style-guideLinks
Best practices for readable, sharable, and verifiable R code
☆18Updated 6 years ago
Alternatives and similar repositories for R-style-guide
Users that are interested in R-style-guide are comparing it to the libraries listed below
Sorting:
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Updated 6 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated 2 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- App for hosting gene expression/ontology data with Shiny☆17Updated 7 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- Perform microbiome-wide association studies with a variety of models☆18Updated 8 years ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Updated 6 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 4 years ago
- [DEPRECATED] An R package for Google Genomics API queries.☆45Updated 2 years ago
- A flexible python program for generating figures from regions of the genome.☆13Updated 6 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 8 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Updated 10 years ago
- ☆28Updated 7 years ago
- NExt generation Analysis Toolbox☆14Updated 10 years ago
- Class materials for the NIH HPC snakemake class☆15Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated last year
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 2 months ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- Visualization and charting JS library for streaming genomic data☆19Updated last year
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated last month
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated 4 months ago
- Nozzle is a report generation toolkit for data analysis pipelines implemented in R.☆67Updated 9 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Onboarding materials for the Greene Lab☆31Updated this week
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated last week