EvanBaugh / VIPURLinks
A method for identifying deleterious protein variation.
☆11Updated 9 years ago
Alternatives and similar repositories for VIPUR
Users that are interested in VIPUR are comparing it to the libraries listed below
Sorting:
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- ☆13Updated 4 years ago
- ☆15Updated 9 years ago
- Shepherd: accurate clustering for correcting DNA barcode errors: https://doi.org/10.1093/bioinformatics/btac395☆11Updated 2 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆12Updated 2 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 weeks ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆29Updated 10 months ago
- Source code for MutPred2.0☆14Updated 7 months ago
- SARS-CoV-2 RBD antibody escape calculator☆12Updated last year
- Find common blocks and differences between DNA sequences☆42Updated 2 weeks ago
- antimicrobial peptide prediction in R☆33Updated 11 months ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14Updated 7 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Deep learning embedding for nucleotide sequences☆19Updated 7 months ago
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆15Updated 4 years ago
- MHC-II presentation predictor☆13Updated 2 years ago
- Open source short linear motif discovery and sequence analysis☆25Updated last year
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- A python framework for microbial natural products data mining by integrating genomics and metabolomics data☆21Updated 2 weeks ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- Detecting Sequence Signals in Targeting Peptides Using Deep Learning☆13Updated 6 years ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 8 years ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 3 years ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆35Updated 2 years ago
- Protein Sequence Annotation with Language Models☆24Updated 5 months ago
- Major Histocompatibility Complex (MHC) Binding Affinity Prediction☆10Updated 4 years ago
- Python package to query and analyse UniProt☆25Updated 5 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year