Variant calling from sequence reads using cloud computing
☆40Jan 14, 2014Updated 12 years ago
Alternatives and similar repositories for crossbow
Users that are interested in crossbow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Jan 15, 2017Updated 9 years ago
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆73Dec 2, 2022Updated 3 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Sep 6, 2016Updated 9 years ago
- The Opentrons fork of buildroot for building the OT2 system. Our default branch is opentrons-develop.☆14Apr 7, 2026Updated last week
- RNA mapping pipeline☆18Jun 3, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Variant Caller, Distributed. Apache 2 licensed.☆71Mar 11, 2019Updated 7 years ago
- Step-wise assembly of the neonatal virome modulated by breast feeding.☆11Aug 20, 2021Updated 4 years ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 5 years ago
- For original Nature Biotechnology Publication (Q1 2012)☆27Jul 9, 2017Updated 8 years ago
- codoff: a program to measure the irregularity of the codon usage for a single genomic region (e.g. a BGC, prophage, etc.) relative to the…☆13Jan 19, 2026Updated 2 months ago
- The Synthetic Biology Open Language (SBOL)☆23Apr 25, 2023Updated 2 years ago
- Miniature LIMS and workflow manager for bioinformatics☆41Aug 17, 2011Updated 14 years ago
- Cytoscape interface to STRING and STITCH☆11May 9, 2025Updated 11 months ago
- AnIML XML schemas☆20Oct 27, 2025Updated 5 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- AnIML Technique Definitions☆17Oct 27, 2025Updated 5 months ago
- Simulate short-reads datasets using probabilistic models☆11Jun 1, 2013Updated 12 years ago
- Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing☆17Jan 19, 2018Updated 8 years ago
- Bash one-liners☆28Oct 17, 2013Updated 12 years ago
- Binnacle: Using Scaffolds to Improve the Contiguity and Quality of Metagenomic Bins☆15Dec 7, 2021Updated 4 years ago
- Utility functions for web applications☆23Oct 3, 2024Updated last year
- Scripts for next generation sequencing analyses☆15Nov 6, 2025Updated 5 months ago
- A simple library to parse out specific elements of a larger JSON object or JSON array based on a provided JSON filter.☆11Jan 6, 2023Updated 3 years ago
- renders a KEGGML file and displays a KEGG pathway☆10Jul 14, 2016Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- An RNA pipeline built on top of ADAM. Apache 2 licensed.☆19Jan 19, 2018Updated 8 years ago
- An R package to query SNPedia☆11Apr 15, 2024Updated 2 years ago
- Environment modules for the ILRI, Nairobi HPC cluster☆11Updated this week
- Ruby version SDK for bosonnlp.com☆20Oct 20, 2014Updated 11 years ago
- A needle plot for mutation data☆27Aug 31, 2017Updated 8 years ago
- Javascript library for visualizing OncoGrids and related tracks☆26Aug 14, 2020Updated 5 years ago
- A web interface for Torque Resource Manager☆19Jan 9, 2014Updated 12 years ago
- lightning☆11Oct 20, 2015Updated 10 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- SWIG-Python wrappers implementing SBOL 2.2☆25Jan 20, 2022Updated 4 years ago
- ☆13Feb 4, 2015Updated 11 years ago
- Grid Operations Configuration Management Database. A Repository, Portal and REST style API for managing Grid and Cloud topology objects i…☆12Mar 30, 2026Updated 2 weeks ago
- python module for querying the vicc knowledgebase integration datastore☆11Jul 6, 2023Updated 2 years ago
- Basic, no assumptions, multi-pileup☆24Mar 26, 2014Updated 12 years ago
- This is sed (unix stream editor) cheat sheet.☆46Dec 2, 2009Updated 16 years ago
- A Binder-compatibible repo with a Dockerfile☆11Aug 18, 2017Updated 8 years ago