BenLangmead / crossbowLinks
Variant calling from sequence reads using cloud computing
☆39Updated 11 years ago
Alternatives and similar repositories for crossbow
Users that are interested in crossbow are comparing it to the libraries listed below
Sorting:
- A scalable genome browser. Apache 2 licensed.☆125Updated 2 years ago
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆70Updated 2 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- GenomicsDB☆111Updated 2 years ago
- An app store for scientific workflows, tools, notebooks, and services☆127Updated this week
- SparkBWA is a new tool that exploits the capabilities of a Big Data technology as Apache Spark to boost the performance of one of the mos…☆69Updated 5 years ago
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆40Updated 5 months ago
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆74Updated 4 years ago
- Isaac Genome Alignment Software☆36Updated 10 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆218Updated 2 years ago
- Deprecated☆100Updated 5 years ago
- Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bu…☆30Updated this week
- Server wrapper that turns command line tools into web services☆61Updated 6 years ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated 2 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- BigDataScript: Scirpting language for big data☆92Updated 4 years ago
- Official code repository for GATK versions 1.0 through 3.7 (full licensed package). For GATK 4 code, see the https://github.com/broadinst…☆143Updated 6 years ago
- New url: https://github.com/biointec/halvade☆19Updated 8 years ago
- Population Stratification Analysis on Genomics Data Using Deep Learning☆26Updated 8 years ago
- The WES API is a standard way to run and manage portable workflows.☆85Updated 9 months ago
- Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk…☆294Updated 6 years ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆41Updated 4 months ago
- Python graph database framework for bioinformatics☆93Updated 3 years ago
- machine learning for genomic variants☆145Updated 9 months ago
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Updated 7 years ago
- The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …☆104Updated 2 years ago
- DNAnexus platform client libraries☆96Updated 3 weeks ago
- This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka☆37Updated 8 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- NGS Language Bindings☆119Updated last year