BenLangmead / crossbowLinks
Variant calling from sequence reads using cloud computing
☆40Updated 11 years ago
Alternatives and similar repositories for crossbow
Users that are interested in crossbow are comparing it to the libraries listed below
Sorting:
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆72Updated 2 years ago
- A scalable genome browser. Apache 2 licensed.☆125Updated 2 years ago
- SparkBWA is a new tool that exploits the capabilities of a Big Data technology as Apache Spark to boost the performance of one of the mos…☆69Updated 6 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka☆37Updated 8 years ago
- Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk…☆295Updated 7 years ago
- GenomicsDB☆110Updated 2 years ago
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆40Updated 7 months ago
- An app store for scientific workflows, tools, notebooks, and services☆131Updated last week
- An Open Computational Genomics Analysis platform for big data genomics analysis. OpenCGA is maintained and develop by its parent company …☆173Updated this week
- Official code repository for GATK versions 1.0 through 3.7 (full licensed package). For GATK 4 code, see the https://github.com/broadinst…☆143Updated 7 years ago
- New url: https://github.com/biointec/halvade☆19Updated 8 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆219Updated 2 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- Server wrapper that turns command line tools into web services☆60Updated 7 years ago
- Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data☆294Updated 2 weeks ago
- machine learning for genomic variants☆147Updated this week
- NGS Language Bindings☆119Updated last year
- Browser for ExAC consortium data☆106Updated 3 years ago
- a lightweight db framework for exploring genetic variation.☆322Updated 5 years ago
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Updated 7 years ago
- Isaac Genome Alignment Software☆36Updated 10 years ago
- Population Stratification Analysis on Genomics Data Using Deep Learning☆26Updated 9 years ago
- The WES API is a standard way to run and manage portable workflows.☆85Updated 2 weeks ago
- A Java API for high-throughput sequencing data (HTS) formats.☆287Updated last month
- A Python library for interacting with the Galaxy API☆92Updated this week
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆75Updated 3 weeks ago
- High-Performance NoSQL database and RESTful web services to access to most relevant biological data. Found a bug or have an idea for a ne…☆92Updated last week
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago