Ready-to-go Parquet-formatted public 'omics datasets
☆30Nov 2, 2015Updated 10 years ago
Alternatives and similar repositories for eggo
Users that are interested in eggo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Population Stratification Analysis on Genomics Data Using Deep Learning☆25Sep 5, 2016Updated 9 years ago
- Parallel Genomic Analysis Toolkit☆14Feb 11, 2019Updated 7 years ago
- An example of bioinformatics and bigdata tools can playing nicely together☆14May 17, 2016Updated 10 years ago
- Integrate the GA4GH schemas and probably a scala impl of the service.☆14May 20, 2016Updated 10 years ago
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆41Feb 13, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SparkBWA is a new tool that exploits the capabilities of a Big Data technology as Apache Spark to boost the performance of one of the mos…☆70Sep 5, 2019Updated 6 years ago
- Bioinformatics Ketrew Pipelines☆28Nov 14, 2021Updated 4 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12May 21, 2024Updated 2 years ago
- General utility code used across BDG products. Apache 2 licensed.☆18Mar 17, 2026Updated 3 months ago
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Apr 13, 2018Updated 8 years ago
- Load genomic BAM files using Apache Spark☆21Jun 17, 2018Updated 8 years ago
- Open Targets Genetics UI☆15Jan 31, 2025Updated last year
- Epigenetic Smoking status Estimator☆10Nov 24, 2020Updated 5 years ago
- requirements, examples, and tests for expression matrix file formats☆22Sep 18, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- low-level helpers for Apache Spark libraries and tests☆16Dec 29, 2018Updated 7 years ago
- Scala client for the Lightning data visualization server (WIP)☆47Jun 25, 2019Updated 7 years ago
- Secure Cloud Object REsource: file transfer microservice☆20May 25, 2026Updated last month
- A Variant Caller, Distributed. Apache 2 licensed.☆72Mar 11, 2019Updated 7 years ago
- ☆30Oct 6, 2021Updated 4 years ago
- VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information☆33Sep 28, 2017Updated 8 years ago
- An example project for doing grid search in MLlib☆13Nov 27, 2014Updated 11 years ago
- Personalized cancer epitope discovery and peptide vaccine prediction pipeline☆30Nov 14, 2017Updated 8 years ago
- [NOTE: Repository has moved to github.com/amplab/spark-ec2]☆57Aug 10, 2015Updated 10 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Reproducing Distributed Systems and Experiments on Cloud☆41Sep 11, 2023Updated 2 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Sep 6, 2016Updated 9 years ago
- Benchmarking toolkit for variant calling☆48Oct 13, 2020Updated 5 years ago
- ☆14Mar 26, 2024Updated 2 years ago
- ☆16Mar 26, 2026Updated 3 months ago
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆222Oct 28, 2022Updated 3 years ago
- ☆10Mar 7, 2023Updated 3 years ago
- COVID-19 Diagnostic Processing Dashboard☆20Jun 30, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Miscellaneous functionality for manipulating Apache Spark RDDs.☆22Dec 29, 2018Updated 7 years ago
- ☆10Feb 3, 2020Updated 6 years ago
- Transactions, Keys, and Values☆22Nov 3, 2017Updated 8 years ago
- Sample App. Amazon Product Descriptions Wordcloud. Spark Streaming, Algebird, Storehaus, Redis, Scala Scraper, OpenNLP, Play Framework, D…☆12Nov 9, 2015Updated 10 years ago
- Exports a list of links, filtered by at least one tag, from a Pinboard account. Currently supports HTML, Markdown, Textile, MediaWiki-mar…☆16Jun 3, 2014Updated 12 years ago
- Deep Treatment Learning (R)☆17Nov 9, 2022Updated 3 years ago
- Seqnature: incorporate SNPs and Indels into a reference genome☆16Sep 6, 2016Updated 9 years ago