Examples of how to get started with genomics data in BigQuery in many languages.
☆53Jun 9, 2017Updated 8 years ago
Alternatives and similar repositories for getting-started-bigquery
Users that are interested in getting-started-bigquery are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Documentation for the Google Genomics cookbook.☆141May 20, 2020Updated 5 years ago
- Framework for running bioinformatic workflows and pipelines using the Google Pipelines API as the underlying task-runner.☆12Mar 22, 2017Updated 9 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- Documentation for NCBI BLAST AMI☆11Feb 28, 2022Updated 4 years ago
- Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:☆17Jul 22, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Recipes for bioinformatics analyses with scikit-bio☆47Sep 8, 2025Updated 6 months ago
- Generic methods, types and modules for the BioJulia ecosystem.☆12Jul 11, 2024Updated last year
- reference free variant assembly☆34Jul 14, 2023Updated 2 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Nov 27, 2017Updated 8 years ago
- Examples of kallisto + sleuth☆11May 18, 2017Updated 8 years ago
- Pipeline of tools to process raw fastq data and produce meaningful genomic data☆14Feb 20, 2020Updated 6 years ago
- A library for next generation genomics in Python 3☆18Jun 7, 2018Updated 7 years ago
- [DEPRECATED] An R package for Google Genomics API queries.☆45Mar 15, 2023Updated 3 years ago
- De novo genome assembly and multisample variant calling☆112Mar 28, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- MAW: a suite on the computation and application of Minimal Absent Words☆16Nov 1, 2021Updated 4 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Oct 15, 2025Updated 5 months ago
- screenlamp is a Python toolkit for hypothesis-driven virtual screening☆24Mar 19, 2018Updated 8 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 7 years ago
- Tools for developing and running pipelines with the Genomics API☆24Jan 16, 2020Updated 6 years ago
- Sweep-line algorithm for genomic features. Detect overlaps on large files w/ minimal memory.☆10Sep 13, 2011Updated 14 years ago
- Docker image of JBrowse Genome Browser☆15Apr 12, 2021Updated 4 years ago
- This is the R implementation of a robust correlation matrix estimator usefull in case of high-dimensional data to remove the bias. It al…☆14Mar 10, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Exposing public genomics data via computable and searchable metadata☆13Jul 9, 2024Updated last year
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Apr 13, 2018Updated 7 years ago
- JavaScript Sequence Alignment Viewer☆11Mar 25, 2022Updated 4 years ago
- A JBrowse 1 plugin to view multiple alignment format (MAF) files☆27Oct 25, 2023Updated 2 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Aug 23, 2019Updated 6 years ago
- Bokeh tutorial, PyData Berlin☆10May 29, 2015Updated 10 years ago
- Introduction to the Command Line for Genomics☆67Updated this week
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Mar 13, 2026Updated 2 weeks ago
- Library for manipulating genomic variants and predicting their effects☆86Feb 16, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Cosmo is a fast, low-memory DNA assembler using a Succinct (variable order) de Bruijn Graph.☆53Mar 12, 2024Updated 2 years ago
- More tools for Python☆51Oct 11, 2019Updated 6 years ago
- Targeted Amplicon Bisulfite Sequencing Analysis Tool☆11May 8, 2019Updated 6 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 3 years ago
- GenNotes – public consensus annotation of genetic variants☆11Mar 27, 2016Updated 10 years ago
- Grinder is a versatile open-source bioinformatic tool to create simulated omic shotgun and amplicon sequence libraries for all main seque…☆18Aug 30, 2018Updated 7 years ago
- The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …☆106Jan 11, 2023Updated 3 years ago