Bioconductor / GoogleGenomicsLinks
[DEPRECATED] An R package for Google Genomics API queries.
☆45Updated 2 years ago
Alternatives and similar repositories for GoogleGenomics
Users that are interested in GoogleGenomics are comparing it to the libraries listed below
Sorting:
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 5 months ago
- Companion repo for ExAC paper, 2015☆33Updated 8 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 5 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆43Updated 5 months ago
- RNA-Seq Snakemake example with Jekyll homepage creation☆20Updated 11 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Updated 7 years ago
- Glimma R package☆50Updated 9 months ago
- Transcript quantification import with automatic metadata detection☆68Updated 3 weeks ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- Analysis from kallisto paper☆32Updated 9 years ago
- R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)☆24Updated 4 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Updated 6 years ago
- Lollipop-diagram to interactively visualize genetic mutations☆31Updated 8 months ago
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆35Updated 3 years ago
- Quick access to gene synonyms☆28Updated this week
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).☆30Updated 7 years ago
- A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor☆42Updated 9 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 3 weeks ago
- [DEPRECATED] Docker containers for Bioconductor☆49Updated 2 years ago
- Reactome Pathway Analysis☆42Updated last month
- Template for building a bioconductor workshop package using github actions☆20Updated 10 months ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year