A Python workflow to study protein-protein coevolution and interaction
☆21Jun 30, 2017Updated 8 years ago
Alternatives and similar repositories for pycoevol
Users that are interested in pycoevol are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 7 years ago
- A client for the Ensembl REST API written in the Python programming language☆29Dec 8, 2025Updated 4 months ago
- Code to accompany my blog post "Dissecting the Hype With Cheminformatics"☆12Sep 22, 2019Updated 6 years ago
- ☆13Sep 1, 2020Updated 5 years ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- scripts for analyzing molecular dynamics trajectories using VMD☆40May 28, 2015Updated 10 years ago
- ☆15Mar 25, 2016Updated 10 years ago
- ChEMBL Database used to create Lipinski Descriptors (ADME Pharmokinetic Profile) to use in a Random Forest Regression Model☆15Nov 8, 2020Updated 5 years ago
- UNMAINTAINED - USE AT YOUR OWN RISKS☆66Mar 16, 2013Updated 13 years ago
- EViS: an Enhanced Virtual Screening Approach based on Pocket Ligand Similarity☆14Dec 7, 2021Updated 4 years ago
- Code for "De novo molecular design with chemical language models"☆13Nov 10, 2021Updated 4 years ago
- Code for the analyses in the human reference interactome paper.☆28Dec 8, 2022Updated 3 years ago
- Multifastats: Multi-Fasta Sequence Stats. Free python-based program that, from a set of a set of 'fasta' sequences (as group or individua…☆10Feb 21, 2018Updated 8 years ago
- JavaScript Sequence Alignment Viewer☆11Mar 25, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- scripts for parsing PDB, fasta, and GO☆16Oct 20, 2021Updated 4 years ago
- Bokeh tutorial, PyData Berlin☆10May 29, 2015Updated 10 years ago
- ☆38Sep 24, 2025Updated 6 months ago
- Modeling framework for eTRANSAFE project☆13Aug 6, 2025Updated 8 months ago
- A light-weight PyTorch extension for equivariant deep learning☆18Feb 20, 2025Updated last year
- Explainable Data Science Course☆14Oct 8, 2020Updated 5 years ago
- Tutorials for the InterMine Python web client☆14Jun 1, 2022Updated 3 years ago
- RDKit中文教程☆16Jun 21, 2020Updated 5 years ago
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Oct 5, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Pipeline for protein folding using PconsC and Rosetta☆18May 21, 2018Updated 7 years ago
- 🧬 Analyzing compression algorithms for genomic sequencing data☆12Feb 14, 2020Updated 6 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆68Mar 9, 2026Updated last month
- Welcome to Colab_NAMD_suit, your gateway to running MD simulations!☆17Jun 25, 2024Updated last year
- ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms☆18Dec 15, 2021Updated 4 years ago
- PyTorch implementations of protein secondary structure prediction on CB513.☆17Dec 30, 2018Updated 7 years ago
- Applied Quantitative Methods course at the College of Charleston☆21Apr 2, 2026Updated 2 weeks ago
- An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…☆11Sep 17, 2021Updated 4 years ago
- A convolutional neural network to predict PPI interactions☆42Oct 9, 2018Updated 7 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Message Passing Neural Networks for Atomic/Bond Property Prediction☆19Dec 8, 2020Updated 5 years ago
- Contact map analysis for biomolecules; based on MDTraj☆48Jan 25, 2026Updated 2 months ago
- Derive ΔG for single residues from HDX-MS data☆30Mar 30, 2026Updated 2 weeks ago
- Tautomer ratios in solution☆28Sep 20, 2021Updated 4 years ago
- DeepProfile framework, which learns a variational autoencoder (VAE) network from a vast quantity of publicly available gene expression sa…☆19Jun 7, 2018Updated 7 years ago
- Solvent Accessible Surface Areas of Biomolecules and their Complexes☆19Feb 21, 2026Updated last month
- DeepContact Software☆26Jun 16, 2018Updated 7 years ago