goodarzilab / pypage
python implementation of the PAGE algorithm
☆15Updated 9 months ago
Alternatives and similar repositories for pypage:
Users that are interested in pypage are comparing it to the libraries listed below
- Blazing fast toolkit to work with .hic and .cool files☆28Updated this week
- Red-C data processing☆13Updated last year
- Feature-rich Python implementation of the tximport package for gene count estimation.☆33Updated 2 months ago
- ☆19Updated 2 months ago
- Python bindings for hictk: read and write .cool and .hic files directly from Python☆14Updated this week
- A toolkit for analyzing architectural stripes☆19Updated 2 months ago
- Processing and plotting tools for genomics data☆20Updated 2 weeks ago
- Clustering TF motif models from multiple species (mostly focused on Drosophila and human) by similarity to remove redundancy☆25Updated 2 years ago
- ☆33Updated 5 months ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated last year
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆16Updated last year
- Vaeda method for computational doublet annotation