mims-harvard / SPECTRALinks
SPECTRA: Spectral framework for evaluation of biomedical AI models
☆41Updated 7 months ago
Alternatives and similar repositories for SPECTRA
Users that are interested in SPECTRA are comparing it to the libraries listed below
Sorting:
- ProCyon: A multimodal foundation model for protein phenotypes☆45Updated last month
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆27Updated 8 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Updated 2 years ago
- ☆32Updated 3 weeks ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- a collection of colabs useful for molecular biology☆31Updated last year
- ☆43Updated 2 weeks ago
- Evolutionary velocity with protein language models☆94Updated last year
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆33Updated 2 years ago
- ☆36Updated 8 months ago
- ColabFold protocol☆54Updated 11 months ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Biological prediction models made simple.☆44Updated 2 weeks ago
- GraphPart, a data partitioning method for ML on biological sequences☆30Updated last year
- Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike☆46Updated 3 years ago
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆17Updated 3 years ago
- Arnie-based DegScore tool.☆26Updated 3 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- ☆39Updated 4 years ago
- ☆25Updated 2 years ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Reference-free analysis of genetic architecture☆18Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆62Updated last year
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆17Updated 3 years ago
- Diverse Genomic Embedding Benchmark☆47Updated last month
- ☆44Updated last year
- Fast and accurate protein structure prediction☆55Updated 8 months ago
- Code for LazyAF pipeline☆20Updated last year