mims-harvard / SPECTRALinks
SPECTRA: Spectral framework for evaluation of biomedical AI models
☆41Updated 9 months ago
Alternatives and similar repositories for SPECTRA
Users that are interested in SPECTRA are comparing it to the libraries listed below
Sorting:
- ProCyon: A multimodal foundation model for protein phenotypes☆51Updated 2 weeks ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 4 years ago
- a collection of colabs useful for molecular biology☆31Updated last year
- Arnie-based DegScore tool.☆27Updated 3 years ago
- GraphPart, a data partitioning method for ML on biological sequences☆32Updated 2 years ago
- Biological prediction models made simple.☆46Updated 3 weeks ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- ☆47Updated last month
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Updated last year
- Evolutionary velocity with protein language models☆94Updated this week
- ☆32Updated 2 months ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 3 months ago
- Predict the structure of immune receptor proteins☆56Updated last year
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆29Updated 10 months ago
- Diverse Genomic Embedding Benchmark☆49Updated 3 months ago
- ☆36Updated 10 months ago
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆17Updated 3 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- ☆39Updated 4 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- Long disorder consensus predictor☆17Updated 3 months ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆54Updated 4 months ago
- ColabFold protocol☆57Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆66Updated 3 years ago
- ☆47Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆64Updated last year
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆18Updated 3 years ago