A Jupyter wrapper for the igv.js library (representation of genomic data)
☆26Feb 16, 2021Updated 5 years ago
Alternatives and similar repositories for ipyigv
Users that are interested in ipyigv are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Module for embedding igv.js in an IPython notebook☆82Feb 7, 2025Updated last year
- Mini installer that contains everything that's necessary to run rhumba☆14May 18, 2021Updated 5 years ago
- ☆16Sep 8, 2024Updated last year
- High-performance stochastic modeling of DNA loop extrusion interactions☆18Dec 22, 2025Updated 6 months ago
- Generate random test data for bioinformatics☆27Jun 17, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Memestra plugin for the Python Language Server☆20Feb 23, 2022Updated 4 years ago
- Dynamically typed N-D expression system based on xtensor☆26Oct 20, 2021Updated 4 years ago
- Library for indexing VCF files for random access searches by rsID☆17Mar 2, 2026Updated 3 months ago
- A Python package for fast operations on 1-dimensional genomic signal tracks☆23Apr 3, 2020Updated 6 years ago
- ☆11Dec 24, 2024Updated last year
- Genomic interval operations on Pandas DataFrames☆193Jun 22, 2026Updated last week
- Rust UMI Directional Adjacency Deduplicator☆15Nov 25, 2019Updated 6 years ago
- Adds programmatic deck support to FoundryVTT☆10Dec 20, 2021Updated 4 years ago
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Modeling Spatio-temporal Dynamics of Chromatin Marks☆12Aug 2, 2021Updated 4 years ago
- GenePattern Python Library☆11Jan 26, 2024Updated 2 years ago
- For bluntifying overlapped GFAs☆13Jul 26, 2024Updated last year
- tabix file access with golang using biogo machinery☆10Jul 1, 2025Updated 11 months ago
- ☆38Oct 12, 2022Updated 3 years ago
- Jupyter kernel for a simple calculator☆20Dec 16, 2024Updated last year
- convert reads from repeated measures of same piece of DNA into spaced matricies for deep learners.☆14Apr 21, 2023Updated 3 years ago
- Extension for Jupyter which integrates igv.js☆154Jun 2, 2026Updated 3 weeks ago
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- The script presents a simple way to visualize features on human chromosome ideograms☆42May 2, 2025Updated last year
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 9 months ago
- Oxbow makes genomic data ready for high-performance analytics.☆153Jun 22, 2026Updated last week
- Bam to Pandas DataFrame, quickly☆13May 10, 2025Updated last year
- python wrapper to dpryan79's bigwig library using cffi☆19May 13, 2016Updated 10 years ago
- Grep for FASTQ files☆104Apr 30, 2026Updated last month
- Build complex types from simple blueprints with Pydantic☆26Feb 8, 2026Updated 4 months ago
- Inline Matplotlib backend for Jupyter☆31May 8, 2026Updated last month
- bedtools-like functionality for interval sets in rust☆55Aug 5, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Quality of life improvements for Bioinformatics in Python.☆33May 21, 2026Updated last month
- starmie: plotting and inference for population structure models☆15Sep 20, 2018Updated 7 years ago
- A simple social media posts scheduler.☆46Dec 20, 2025Updated 6 months ago
- The command-line interface to GGD☆42Oct 16, 2022Updated 3 years ago
- python implementation of the PAGE algorithm☆24Feb 15, 2026Updated 4 months ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 6 months ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 3 months ago