Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
☆27Jul 19, 2022Updated 4 years ago
Alternatives and similar repositories for coessentiality
Users that are interested in coessentiality are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code associated with MIX-seq manuscript☆15Aug 26, 2020Updated 5 years ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Jun 17, 2026Updated last month
- customizable robust Independent Component Analysis (ICA)☆12Sep 16, 2024Updated last year
- Code used for biomarker discovery using party (building conditional random forests)☆15May 18, 2018Updated 8 years ago
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Modeling of time series data for CRISPR KO experiments☆39Updated this week
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Jun 1, 2022Updated 4 years ago
- What you need to process the Quarterly DepMap-Omics releases from Terra☆125Jul 17, 2026Updated last week
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed in…☆129Jun 19, 2026Updated last month
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆32Mar 21, 2019Updated 7 years ago
- Package to Score Sequences using Rule Set 3☆17Nov 10, 2025Updated 8 months ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 5 years ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆12Jul 7, 2026Updated 2 weeks ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Mar 21, 2021Updated 5 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Apr 16, 2020Updated 6 years ago
- ☆12Jan 8, 2026Updated 6 months ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆71Jun 6, 2020Updated 6 years ago
- CWGCNA is an R package to perform causal inference from the WGCNA framework.☆20Oct 26, 2024Updated last year
- Python implementation for investigating the reliability of ICA estimates by clustering and visualization☆19Apr 21, 2022Updated 4 years ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆21Jul 13, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A high-fidelity E. coli RNA-seq compendium☆33Mar 5, 2021Updated 5 years ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Apr 6, 2021Updated 5 years ago
- Graph Neural Network model for survival analysis from multi-omics data☆14Mar 9, 2022Updated 4 years ago
- a tool for annotation of immunoglobulin genes in genome assemblies☆15Sep 22, 2025Updated 10 months ago
- Microarray Analysis Pipeline in Python☆19Aug 1, 2019Updated 6 years ago
- Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…☆165Jul 15, 2026Updated last week
- Javascript package for embedding sequence logos☆19Jun 16, 2025Updated last year
- Jupyter Notebook extension that adds collapsable cells.☆10Jun 21, 2020Updated 6 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆25Feb 13, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆17Feb 16, 2024Updated 2 years ago
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆17Oct 11, 2021Updated 4 years ago
- Bayesian Sparse Additive Perturbation Regression, code and simulations☆16Apr 29, 2025Updated last year
- ☆12Feb 12, 2024Updated 2 years ago
- Python Client Library for the G2P Portal API☆15May 20, 2026Updated 2 months ago
- SCASA: Single cell transcript quantification tool☆23Nov 24, 2023Updated 2 years ago
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆14Oct 19, 2023Updated 2 years ago