kundajelab / coessentiality
Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
☆27Updated 2 years ago
Alternatives and similar repositories for coessentiality:
Users that are interested in coessentiality are comparing it to the libraries listed below
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- Summary statistics for repertoires☆16Updated 2 years ago
- ☆37Updated last year
- Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.☆36Updated 5 years ago
- Explore the cancer relevance of your gene list☆51Updated last month
- Comparison of Adaptive Immune Receptor Repertoires☆26Updated 2 months ago
- A Python package for gene network analysis☆32Updated 2 years ago
- Multi-study integration of cellular trajectories☆19Updated 4 years ago
- ☆17Updated 2 months ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆16Updated 5 years ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago
- Using BCR and expression for sequence embedding☆21Updated 3 weeks ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆28Updated last month
- A project for exploring differentially active signaling paths related to proteomics datasets☆40Updated 5 months ago
- Scripts for building computational models of gene regulation with tensorflow☆27Updated last year
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆25Updated last year
- Knowledge-primed neural networks☆35Updated 2 years ago
- Single Cell Consensus Clustering with Speed☆21Updated 2 years ago
- Code and data used in The Great Repertoire Project☆30Updated 3 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆46Updated last week
- ☆17Updated 10 months ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆25Updated 2 weeks ago
- ☆14Updated 5 years ago
- ☆33Updated 2 years ago
- BAGEL software☆27Updated last year
- ☆42Updated 5 months ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆14Updated 3 years ago
- Genomic sequence preprocessing toolkit☆12Updated 2 weeks ago