genecell / COSGLinks
Accurate and fast cell marker gene identification with COSG
☆54Updated 2 weeks ago
Alternatives and similar repositories for COSG
Users that are interested in COSG are comparing it to the libraries listed below
Sorting:
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 5 months ago
- R package for pathway analysis in scRNA-seq data☆77Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- A tool for semi-automatic cell type harmonization and integration☆117Updated 3 months ago
- ☆48Updated 3 years ago
- Integration of gut cell atlases☆33Updated 3 months ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆88Updated 3 years ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆85Updated 2 years ago
- ☆32Updated 3 years ago
- R implementation of GeneTrajectory☆69Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆115Updated 9 months ago
- Functional Inference of Gene Regulation☆51Updated last year
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- Gene group activity utility functions for Scanpy☆100Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- ☆60Updated 3 weeks ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Updated 3 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- ☆57Updated last year
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆131Updated last year
- A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data☆78Updated 6 months ago
- R package for Protein activity analysis of single-cell RNAseq.☆87Updated 3 years ago
- ☆65Updated 6 years ago
- ☆57Updated last year
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆58Updated this week
- ☆129Updated 3 years ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆87Updated last year
- Analysis of cell-cell communication at single-cell resolution☆106Updated last year
- Draw phylogenetic trees of tumor evolution☆87Updated 2 years ago