A composite regression neural network for latent timing prediction of single-cell RNA-seq data
☆10Jan 21, 2025Updated last year
Alternatives and similar repositories for scltnn
Users that are interested in scltnn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis of epigenetic data in Python☆15Updated this week
- Single-cell dimensionality reduction toolkit☆13Sep 4, 2026Updated 2 months ago
- ☆20May 5, 2024Updated 2 years ago
- ☆16Mar 2, 2023Updated 3 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆20Jan 6, 2026Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Single-cell dimensionality reduction evaluation and benchmarking toolkit☆13Sep 4, 2026Updated 2 months ago
- a tool for biomarker discovery and patient classification using scRNA-seq data☆10Apr 9, 2025Updated last year
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆14Mar 11, 2024Updated 2 years ago
- PIASO: Precise Integrative Analysis of Single-cell Omics☆17Oct 29, 2026Updated 2 weeks ago
- The Rhesus Immune Reference Atlas: multi-tissue scRNA-seq atlas and code for cell type/state classification☆15Oct 24, 2026Updated 2 weeks ago
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆17May 26, 2026Updated 5 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆31Oct 24, 2024Updated 2 years ago
- ☆11Aug 23, 2022Updated 4 years ago
- Map large-scale single cells to the exact spatial locations☆21Jun 9, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated 2 years ago
- Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.☆17Mar 3, 2026Updated 8 months ago
- This repository comprises Jupyter Notebooks that serve as supplementary material to the journal article titled "Review of Multifidelity M…☆12Sep 23, 2023Updated 3 years ago
- ☆10Dec 11, 2024Updated last year
- ☆12Jan 12, 2024Updated 2 years ago
- ☆12Mar 28, 2023Updated 3 years ago
- Single-cell Analysis of Perturbational Effects using Machine Learning☆21Oct 9, 2025Updated last year
- ☆10Feb 10, 2026Updated 9 months ago
- ☆24Jan 10, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics☆16Sep 3, 2026Updated 2 months ago
- OpenChord is a Python library for creating chord diagrams.☆11Feb 4, 2025Updated last year
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆64May 30, 2024Updated 2 years ago
- Gain biological insights using LLM.☆14Jan 26, 2026Updated 9 months ago
- Code repository for single-cell atlas of Alzheimer's disease progression across brain regions☆42Apr 23, 2024Updated 2 years ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Co-accessibility network from single-cell ATAC-seq data. Python code with AnnData, based on Cicero algorithm.☆37May 23, 2026Updated 5 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆70Oct 29, 2026Updated 2 weeks ago
- Interpret perturbation responses from scRNA-seq perturbation experiments☆20Mar 4, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Pre-clinical drug discovery faces the low efficiency dilemma. One of the reasons is the lack of cross-drug efficacy evaluation infrastruc…☆14Dec 8, 2025Updated 11 months ago
- ☆14Oct 4, 2022Updated 4 years ago
- ☆15Aug 17, 2023Updated 3 years ago
- code related to Shirvalkar et al. 2023 - Nature Neuroscience☆10May 22, 2023Updated 3 years ago
- Use hodge decomposition for trajectory analysis☆26May 11, 2026Updated 6 months ago
- scDrug: From scRNA-seq to Drug Repositioning☆46May 8, 2023Updated 3 years ago
- Multi-fidelity Gaussian Process Regression☆13Mar 22, 2023Updated 3 years ago
Are these results useful?