Alternatives and similar repositories for DeepAAI

Users that are interested in DeepAAI are comparing it to the libraries listed below

• Liuxg16 / GeoPPI
  ☆86Updated 3 years ago
• dahjan / DMS_opt
  ☆72Updated 5 years ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆62Updated 2 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆61Updated last year
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆61Updated 2 years ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆113Updated 6 months ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆41Updated 4 years ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆85Updated last month
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆73Updated 4 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• piercelab / tcrmodel2
  ☆45Updated 6 months ago
• jcchan23 / GraphSol
  Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted cont…
  ☆75Updated 3 years ago
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆90Updated 4 years ago
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆49Updated 4 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆50Updated 3 months ago
• KailiWang1 / DeepDTAF
  a deep learning architecture for protein-ligand binding affinity prediction
  ☆76Updated last year
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆58Updated last month
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆119Updated 6 months ago
• luoyunan / ECNet
  An evolutionary context-integrated deep learning framework for protein engineering
  ☆65Updated 3 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆78Updated 2 months ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆23Updated last year
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆34Updated 5 years ago
• dina-lab3D / NanoNet
  ☆50Updated 2 years ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆70Updated 3 years ago
• ChakradharG / PeptideBERT
  Transformer Based Language Model for Peptide Property Prediction
  ☆47Updated last year
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆74Updated last month
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆45Updated 2 years ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago