☆22Mar 26, 2025Updated 11 months ago
Alternatives and similar repositories for DeepSearch
Users that are interested in DeepSearch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆43Feb 27, 2026Updated 3 weeks ago
- Predicting molecular structure from multimodal spectroscopic data☆19Mar 9, 2026Updated 2 weeks ago
- Collection of peptide de novo sequencing algorithms by BEAM labs☆30Dec 6, 2025Updated 3 months ago
- ☆11Nov 30, 2024Updated last year
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Aug 16, 2023Updated 2 years ago
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆12Nov 23, 2024Updated last year
- Self-supervised learning of molecular representations from millions of tandem mass spectra using DreaMS (Nat Biotechnology)☆166Mar 4, 2026Updated 2 weeks ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆114Dec 15, 2025Updated 3 months ago
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆21Jan 12, 2026Updated 2 months ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆20Oct 15, 2024Updated last year
- ☆22Sep 18, 2025Updated 6 months ago
- ☆18Aug 9, 2019Updated 6 years ago
- Prediction of glycopeptide fragment mass spectra by deep learning☆11Feb 20, 2024Updated 2 years ago
- The code for the article "Fully Automated Unconstrained Analysis of High-Resolution Mass Spectrometry Data with Machine Learning"☆29Jan 20, 2025Updated last year
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- TopPIC suite is a software suite for proteoform identification by top-down mass spectrometry.☆14Mar 10, 2026Updated last week
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆14Jan 22, 2026Updated 2 months ago
- PeakBot - detection of chromatographic and mz profile-mode peaks in LC-HRMS data☆22Feb 9, 2022Updated 4 years ago
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Nov 5, 2022Updated 3 years ago
- ☆14Jan 7, 2026Updated 2 months ago
- ☆21Mar 24, 2025Updated 11 months ago
- ☆107Mar 10, 2026Updated last week
- EasyPQP: Simple library generation for OpenSWATH☆11Updated this week
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆59Dec 11, 2025Updated 3 months ago
- ☆15Oct 16, 2023Updated 2 years ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Feb 28, 2026Updated 3 weeks ago
- ☆22Jun 28, 2021Updated 4 years ago
- [TCSVT2023] - ESA: External Space Attention Aggregation for Image-Text Retrieval☆23Aug 30, 2024Updated last year
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Oct 31, 2025Updated 4 months ago
- R functions underlying ExpressAnalyst☆14Updated this week
- Highly accurate and large-scale collision cross section prediction with graph neural network for compound identification☆17Jun 19, 2023Updated 2 years ago
- Preprocessing of datasets of chemical reactions: standardization, filtering, augmentation, tokenization, etc.☆16Sep 10, 2025Updated 6 months ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Apr 25, 2025Updated 10 months ago
- ☆10Oct 30, 2024Updated last year
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆14Oct 17, 2024Updated last year
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Jan 7, 2026Updated 2 months ago
- Deep learning tools and models for MALDI-TOF mass spectra analysis☆28Jan 19, 2026Updated 2 months ago
- ☆72Aug 21, 2024Updated last year
- ☆41Apr 10, 2025Updated 11 months ago