☆12Jun 13, 2024Updated last year
Alternatives and similar repositories for SMSNet
Users that are interested in SMSNet are comparing it to the libraries listed below
Sorting:
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆41Oct 30, 2024Updated last year
- ☆17Oct 1, 2024Updated last year
- ☆14Jan 7, 2026Updated 2 months ago
- ☆15Oct 16, 2023Updated 2 years ago
- Pytorch implementation of DeepNovoV2, a state-of-the-art de novo peptide sequencing model.☆27May 21, 2019Updated 6 years ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆44Feb 23, 2024Updated 2 years ago
- ☆15May 30, 2025Updated 9 months ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆34Aug 4, 2023Updated 2 years ago
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆29Oct 15, 2024Updated last year
- The Interactive Peptide Spectral Annotator☆21Jun 9, 2020Updated 5 years ago
- Protein Identification with Deep Learning☆102Nov 27, 2020Updated 5 years ago
- AutoRT: Peptide retention time prediction using deep learning☆30Jul 31, 2024Updated last year
- ☆43Feb 27, 2026Updated 3 weeks ago
- A list of tools on proteomics using deep learning☆106May 5, 2024Updated last year
- A deep learning toolkit for mass spectrometry☆87Jan 7, 2026Updated 2 months ago
- HLA-I ligand predictor☆44Sep 24, 2025Updated 5 months ago
- Paper collection about de novo peptide Sequening☆23Feb 5, 2025Updated last year
- Python package for efficient mass spectrometry data processing and visualization☆164Mar 5, 2026Updated 2 weeks ago
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆21Jan 12, 2026Updated 2 months ago
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆180Updated this week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated this week
- Proteomics Mass Spectrometry Datasets for Machine Learning☆22Aug 16, 2024Updated last year
- ☆12Mar 28, 2022Updated 3 years ago
- DLL and SO from Bruker.☆12Feb 25, 2026Updated 3 weeks ago
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 3 years ago
- Code of the all the data augmentation [ Based on our survey, that will soon be published ]☆10Jul 5, 2023Updated 2 years ago
- ☆10Mar 4, 2026Updated 2 weeks ago
- Report processing and protein quantification for MS-based proteomics☆52Jun 29, 2023Updated 2 years ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆74Mar 13, 2026Updated last week
- Code for ACL 2023 Oral Paper: ManagerTower: Aggregating the Insights of Uni-Modal Experts for Vision-Language Representation Learning☆12Aug 23, 2025Updated 6 months ago
- ☆22May 30, 2023Updated 2 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆12May 11, 2021Updated 4 years ago
- 🐦 spideog - Command line utility for Kraken2 reports.☆11Nov 30, 2020Updated 5 years ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Feb 28, 2026Updated 3 weeks ago
- Wrapper object for "structure of arrays" coding style☆15Sep 26, 2020Updated 5 years ago
- ☆16Oct 11, 2022Updated 3 years ago
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Feb 17, 2026Updated last month
- Estimation of isoelectric point of peptides and proteins using support vector machines (SVM).☆10Sep 10, 2016Updated 9 years ago
- ☆15Jun 3, 2021Updated 4 years ago