PHOENIXcenter / pi-HelixNovoLinks
☆13Updated 3 weeks ago
Alternatives and similar repositories for pi-HelixNovo
Users that are interested in pi-HelixNovo are comparing it to the libraries listed below
Sorting:
- ☆15Updated 2 years ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆44Updated last year
- HLA-I ligand predictor☆43Updated 4 months ago
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆20Updated last year
- Code for LazyAF pipeline☆22Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆33Updated 2 years ago
- RiboNN: predicting translation efficiencies from mRNA sequences☆50Updated 2 weeks ago
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆26Updated last year
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Updated last year
- Virus Protein Structural Analysis Toolkit☆14Updated last year
- Fast protein domain structure embedding+search tool☆27Updated 4 months ago
- Python framework for doing ancestral sequence reconstruction☆43Updated last year
- DeepECtransformer☆29Updated 2 years ago
- ☆42Updated last week
- Decoding the functional networks of non-model organisms☆12Updated last month
- A method to predict DNA shape features considering farther flanking region.☆38Updated last year
- Python Implementation of Codon Adaption Index☆37Updated 3 years ago
- Evolutionary conservation estimation of residues or nucleotides☆57Updated 3 years ago
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆58Updated 9 months ago
- ☆12Updated last year
- ☆20Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆25Updated 2 years ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago
- Next generation sequence parameter library for proteins☆38Updated 3 weeks ago
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆19Updated 6 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated 2 weeks ago
- Comprehensive Python client for the Uniprot REST API☆55Updated 3 months ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆33Updated last month
- Feature map and function annotation of Proteins☆34Updated last year