PHOENIXcenter / pi-HelixNovoLinks
☆12Updated last month
Alternatives and similar repositories for pi-HelixNovo
Users that are interested in pi-HelixNovo are comparing it to the libraries listed below
Sorting:
- ☆15Updated last year
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆42Updated last year
- Virus Protein Structural Analysis Toolkit☆12Updated last year
- Protein Sequence Annotation with Language Models☆24Updated 4 months ago
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆25Updated 11 months ago
- DeepECtransformer☆28Updated last year
- HLA-I ligand predictor☆43Updated 2 weeks ago
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Updated last year
- Fast protein domain structure embedding+search tool☆25Updated 2 weeks ago
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆20Updated last year
- Decoding the functional networks of non-model organisms☆11Updated 2 months ago
- Code for LazyAF pipeline☆20Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- GraphPart, a data partitioning method for ML on biological sequences☆30Updated last year
- An LC-MS/MS glycan and glycopeptide search engine☆13Updated 3 weeks ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated 2 years ago
- Finding patch of conserved amino acid sites in 3D structure☆12Updated 5 months ago
- ☆22Updated last week
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆19Updated this week
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- MS/MS prediction for peptides☆24Updated 4 years ago
- ☆38Updated last month
- Phyla: Towards a Foundation Model for Phylogenetic Inference☆22Updated 3 months ago
- Diverse Genomic Embedding Benchmark☆47Updated last month
- Next generation sequence parameter library for proteins☆35Updated 3 weeks ago
- Genomic language model predicts protein co-regulation and function☆81Updated 6 months ago
- A package for making tree-based visualizations for embedding vectors☆10Updated 2 years ago
- ☆14Updated last year
- Map genetic variants and protein positions to protein interfaces in 3D☆13Updated 2 years ago
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆39Updated 11 months ago