AmadeusloveIris / GraphNovoLinks
☆15Updated 2 years ago
Alternatives and similar repositories for GraphNovo
Users that are interested in GraphNovo are comparing it to the libraries listed below
Sorting:
- ☆41Updated last month
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆43Updated last year
- ☆15Updated last year
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆25Updated last year
- Evolutionary velocity with protein language models☆94Updated last week
- ☆13Updated 3 weeks ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆107Updated this week
- ColabFold protocol☆57Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- ☆74Updated last year
- Protein language model trained on coding DNA☆51Updated last year
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆76Updated 3 months ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- Evolutionary conservation estimation of residues or nucleotides☆56Updated 3 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- Detection of remote homology by comparison of protein language model representations☆58Updated last year
- ☆39Updated 4 years ago
- Cross-protein transfer learning for variant effect prediction☆20Updated 2 years ago
- Feature map and function annotation of Proteins☆34Updated last year
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- Benchmarking Pipeline for Prediction of Protein-Protein Interactions☆14Updated 3 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆58Updated this week
- Code for LazyAF pipeline☆21Updated last year
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆34Updated 5 years ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆35Updated last month
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 3 months ago
- Post-processing peptide de novo sequences to improve their accuracy☆10Updated 3 years ago