De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments
☆123Jun 8, 2026Updated last month
Alternatives and similar repositories for InstaNovo
Users that are interested in InstaNovo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Oct 16, 2023Updated 2 years ago
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆191Jun 24, 2026Updated 2 weeks ago
- ☆14Jun 26, 2026Updated last week
- ☆45Feb 27, 2026Updated 4 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆22Mar 26, 2025Updated last year
- A CLI for pairwise alignment of sequences, using both normal and mass based alignment.☆17Jun 3, 2026Updated last month
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆45Feb 23, 2024Updated 2 years ago
- PepQuery: a targeted peptide search engine☆15May 1, 2024Updated 2 years ago
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆32Oct 15, 2024Updated last year
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆41Jun 10, 2026Updated 3 weeks ago
- Collection of peptide de novo sequencing algorithms by BEAM labs☆31May 24, 2026Updated last month
- A deep learning toolkit for mass spectrometry☆95May 31, 2026Updated last month
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Jun 5, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- HLA-I ligand predictor☆46Mar 19, 2026Updated 3 months ago
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Updated this week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆55Jun 24, 2026Updated 2 weeks ago
- KDS software for Kinase Drug Selectivity☆10Jun 22, 2026Updated 2 weeks ago
- DIA-BERT: a pre-trained model for data-independent acquisition mass spectrometry-based proteomics data analysis☆24Sep 3, 2025Updated 10 months ago
- Tools for annotation, processing and ML for antibody sequences☆44Jun 23, 2026Updated 2 weeks ago
- ☆17Oct 1, 2024Updated last year
- A Python package for peptide sequence analysis built around ProForma 2.1 notation. Calculate masses, generate fragments, predict isotopic…☆17Jun 28, 2026Updated last week
- Proteomics search & quantification so fast that it feels like magic☆297Jun 5, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- modular & open DIA search☆110Jun 29, 2026Updated last week
- AutoML system for building trustworthy peptide bioactivity predictors☆40Jun 19, 2026Updated 2 weeks ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆52Jun 19, 2026Updated 2 weeks ago
- ☆23Mar 15, 2024Updated 2 years ago
- Paper collection about de novo peptide Sequening☆24Feb 5, 2025Updated last year
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆14Nov 23, 2024Updated last year
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆38Jun 10, 2024Updated 2 years ago
- Data Processing Kitchen Sink for proteomics data☆14Jun 15, 2026Updated 3 weeks ago
- PoGo is a proteogenomic tool which allows mapping of peptides identified through mass spectrometry to a reference genome through provided…☆12Jul 8, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Democratizing ML in proteomics☆55May 6, 2026Updated 2 months ago
- ☆12Jun 13, 2024Updated 2 years ago
- Deep learning framework for proteomics☆154Jun 10, 2026Updated 3 weeks ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Jun 19, 2026Updated 2 weeks ago
- A label free quantification tool.☆20Jan 13, 2026Updated 5 months ago
- ☆11Feb 4, 2025Updated last year
- Processing and analysis of proteomics data☆17Jun 24, 2026Updated 2 weeks ago