wilhelm-lab / dlomix
Python framework for Deep Learning in Proteomics
☆25Updated last month
Alternatives and similar repositories for dlomix:
Users that are interested in dlomix are comparing it to the libraries listed below
- An open-source Python package to unify raw MS data accession and storage.☆21Updated last week
- Rescoring and spectral library generation pipeline for proteomics.☆40Updated last week
- Democratizing ML in proteomics☆34Updated this week
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆42Updated 3 weeks ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated this week
- modular & open DIA search☆66Updated this week
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- ☆36Updated 2 weeks ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated last month
- ☆17Updated last month
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆62Updated last week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆47Updated last week
- Python package for investigating the structural context of PTMs☆28Updated 2 months ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆47Updated 2 weeks ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆14Updated 7 months ago
- Instrument Application Programming Interface☆45Updated last month
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆25Updated 4 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆50Updated last week
- ☆25Updated 2 months ago
- ☆13Updated 6 months ago
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆32Updated last month
- MS/MS prediction for peptides☆22Updated 4 years ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆21Updated this week
- ☆15Updated 3 years ago
- An easy tool empowering everyone to annotate complex spectra☆22Updated this week
- ☆13Updated last year
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆56Updated last week
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆20Updated this week