[NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"
☆13Nov 23, 2024Updated last year
Alternatives and similar repositories for NovoBench
Users that are interested in NovoBench are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Paper collection about de novo peptide Sequening☆23Feb 5, 2025Updated last year
- ☆22Mar 26, 2025Updated last year
- B-cell Hybrid Immune Variant Engine☆12Apr 30, 2026Updated last week
- RetroBridge: Markov Bridge Model for Retrosynthesis Planning☆34Mar 26, 2024Updated 2 years ago
- Code for the paper "NovoMolGen: Rethinking Molecular Language Model Pretraining"☆26Jan 18, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Curated list on Deep Transformers Applications on Biology and Chemistry☆19Apr 8, 2023Updated 3 years ago
- Library of models for Protein Function prediction (part of the 18th top solution out of 1625 teams in CAFA5)☆20May 23, 2025Updated 11 months ago
- ☆19Jan 20, 2023Updated 3 years ago
- Predicting molecular structure from multimodal spectroscopic data☆26Mar 9, 2026Updated 2 months ago
- Code implementation for the paper "Large-scale Pre-training for Grounded Video Caption Generation" (ICCV 2025)☆30Jan 18, 2026Updated 3 months ago
- Code for the paper "Learning to engineer protein flexibility".☆23Mar 24, 2026Updated last month
- ☆113Mar 10, 2026Updated last month
- Awesome papers and codes list of small molecule mass spectrometry-related machine learning methods☆37Apr 15, 2026Updated 3 weeks ago
- The official PyTorch implementation of Manifold Preserving Guided Diffusion (MPGD)☆39Apr 16, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Graduate Course at Westlake University☆56Oct 14, 2025Updated 6 months ago
- ☆10Feb 22, 2023Updated 3 years ago
- Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences☆12Jul 4, 2025Updated 10 months ago
- ☆13Jul 24, 2024Updated last year
- Self-supervised learning of molecular representations from millions of tandem mass spectra using DreaMS (Nat Biotechnology)☆176Apr 27, 2026Updated last week
- CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes☆44Jun 17, 2025Updated 10 months ago
- ☆11Apr 25, 2026Updated 2 weeks ago
- ☆164Jan 30, 2026Updated 3 months ago
- Stack is a single-cell foundation model that enables in-context learning at inference time.☆128Apr 28, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆13Apr 30, 2026Updated last week
- UniGraph2: Learning a Unified Embedding Space to Bind Multimodal Graphs (WWW'25)☆18Apr 22, 2025Updated last year
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- Database of virus RdRP barcode sequences☆16Jul 5, 2024Updated last year
- ☆17Oct 1, 2024Updated last year
- Reaction-Conditioned Virtual Screening of Enzymes☆42Jun 11, 2025Updated 10 months ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆44Jun 28, 2021Updated 4 years ago
- ☆40Dec 16, 2022Updated 3 years ago
- Predicting Cellular Responses with Variational Causal Inference and Refined Relational Information (ICLR 2023)☆18Jun 15, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆33Oct 14, 2024Updated last year
- NUAA操作系统实验平时作业及往年考试题记录☆11Jul 1, 2022Updated 3 years ago
- ☆21Mar 24, 2025Updated last year
- ORFFinder in Python☆15Aug 24, 2024Updated last year
- CryoBoltz code for protein structure prediction with cryo-EM guidance. NeurIPS 2025.☆36Nov 30, 2025Updated 5 months ago
- Terminal viewer for pdb files☆22Jan 5, 2026Updated 4 months ago
- The official implement of NeurIPS'24 Datasets and Benchmarks Track paper: GLBench: A Comprehensive Benchmark for Graphs with Large Langua…☆72Oct 28, 2024Updated last year