catELMo: Context-Aware Amino Acid Embedding Advances Analysis of TCR-Epitope Interactions
☆15Apr 10, 2025Updated 10 months ago
Alternatives and similar repositories for catELMo
Users that are interested in catELMo are comparing it to the libraries listed below
Sorting:
- ☆12Nov 22, 2024Updated last year
- ☆15Nov 13, 2023Updated 2 years ago
- ☆16Oct 1, 2024Updated last year
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆14Oct 17, 2024Updated last year
- Prediction of B-cell epitopes from amino acid sequences using deep neural networks.☆18Sep 7, 2022Updated 3 years ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆20Oct 15, 2024Updated last year
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆23Mar 19, 2025Updated 11 months ago
- ☆22Oct 4, 2022Updated 3 years ago
- Code for LazyAF pipeline☆23Feb 12, 2024Updated 2 years ago
- a collection of colabs useful for molecular biology☆32Feb 27, 2024Updated 2 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Jul 8, 2024Updated last year
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Jul 28, 2021Updated 4 years ago
- R Shiny application "Vaccine Designer" aiming for the construction of vaccine sequences based on multi epitope design workflow.☆10Jun 25, 2024Updated last year
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆42Dec 26, 2024Updated last year
- Supporting code for Deep Neural Network or Dermatologist?☆10Nov 14, 2019Updated 6 years ago
- PSI-MOD ontology for modified and unmodified amino acid residues☆14Jan 8, 2026Updated last month
- ☆11May 11, 2024Updated last year
- the analysis script for PrismNet☆10May 17, 2020Updated 5 years ago
- ☆10Jan 24, 2021Updated 5 years ago
- ☆10Apr 30, 2025Updated 10 months ago
- A context aware tool for proteasomal cleavage predictions☆15May 30, 2025Updated 9 months ago
- Contact-based protein structure prediction☆10Feb 12, 2019Updated 7 years ago
- ☆17May 23, 2025Updated 9 months ago
- Generating Protein Variants with Different Generative Models (HMM, VAE, ESM-2, ProtGPT2)☆11Mar 14, 2024Updated last year
- Raspberry Pi Telescope Camera with web interface☆12Nov 13, 2021Updated 4 years ago
- Prediction of glycopeptide fragment mass spectra by deep learning☆10Feb 20, 2024Updated 2 years ago
- Predicting T Cell Receptor Specificity with Deep Learning☆10Jul 17, 2019Updated 6 years ago
- Research for the Drone Aerial Tasking Manager☆10Jul 12, 2024Updated last year
- Python interface to cd-hit☆10Feb 26, 2019Updated 7 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 9 months ago
- ☆12Apr 8, 2021Updated 4 years ago
- A set a basic Python scripts to edit a multiple sequence alignment and generate a protein consensus sequence☆18Jun 9, 2022Updated 3 years ago
- Transformer for protein function prediction (version 2)☆15Jan 8, 2026Updated last month
- Sequence-based protein solubility prediction using multidimensional embedding☆12Apr 19, 2021Updated 4 years ago
- EuBIC-MS Developers Meeting 2025 on Computational Mass Spectrometry☆11Nov 8, 2024Updated last year
- ☆10Feb 4, 2025Updated last year
- The Expanded Package for IET Solvation☆13Feb 6, 2025Updated last year
- Sequential Parameter Optimization in Python☆14Jan 12, 2026Updated last month
- Neuroevolution is a Competitive Alternative to Reinforcement Learning for Skill Discovery☆17Jul 11, 2023Updated 2 years ago