jingbo02 / Awesome-Denovo-Peptide-SequencingLinks
Paper collection about de novo peptide Sequening
☆18Updated 6 months ago
Alternatives and similar repositories for Awesome-Denovo-Peptide-Sequencing
Users that are interested in Awesome-Denovo-Peptide-Sequencing are comparing it to the libraries listed below
Sorting:
- Proteomics Mass Spectrometry Datasets for Machine Learning☆19Updated last year
- A deep learning toolkit for mass spectrometry☆82Updated last year
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆13Updated 9 months ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆97Updated 2 weeks ago
- ☆14Updated 11 months ago
- ☆35Updated 2 weeks ago
- ☆14Updated this week
- ☆20Updated 6 months ago
- Predict the structure of immune receptor proteins☆53Updated 9 months ago
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆150Updated 2 weeks ago
- Deep learning framework for proteomics☆131Updated last week
- Efficient implementatin of ESM family.☆69Updated 2 weeks ago
- open source code for Tencent tFold☆110Updated 5 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆32Updated 3 months ago
- TEIM: TCR-Epitope Interaction Modeling☆51Updated 2 years ago
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆92Updated last week
- Learning the language of protein-protein interactions☆90Updated last week
- ☆44Updated 11 months ago
- Democratizing ML in proteomics☆43Updated last week
- ☆36Updated last year
- ☆41Updated 5 months ago
- PLM based active learning model for protein engineering☆82Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆51Updated 3 weeks ago
- ☆66Updated 10 months ago
- Protein language model trained on coding DNA☆49Updated 10 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated 3 weeks ago
- ProteinChat: A frontier protein-language generative model designed to decode the molecular language of proteins.☆57Updated 5 months ago
- ☆15Updated last year
- Inference code for Bio-Inspired Antibody Language Model☆25Updated last year
- Protein design and variant prediction using autoregressive generative models☆110Updated last year