Alternatives and similar repositories for sciPENN

Users that are interested in sciPENN are comparing it to the libraries listed below

• QuKunLab / MultiomeBenchmarking
  ☆49Updated 4 months ago
• GuangyuWangLab2021 / cellDancer
  Predict RNA velocity through deep learning
  ☆70Updated last year
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆54Updated 11 months ago
• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆79Updated 6 months ago
• ZJUFanLab / scRank
  A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…
  ☆50Updated last month
• labomics / midas
  ☆59Updated last week
• datapplab / AutoClass
  ☆44Updated 3 years ago
• theislab / scTab
  ☆59Updated 10 months ago
• JianYang-Lab / MeDuSA
  MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…
  ☆43Updated 4 months ago
• yunguan-wang / SPROD
  SPROD: Spatial expression profiling de-noising
  ☆37Updated 2 years ago
• PYangLab / Matilda
  Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…
  ☆21Updated last month
• YangLabHKUST / Portal
  Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
  ☆31Updated 2 years ago
• Roy-lab / scMTNI
  ☆27Updated this week
• wallet-maker / cytopus
  Single cell omics biology annotations
  ☆51Updated 2 months ago
• Teichlab / celltypist_wiki
  Materials and scripts for building cell type encyclopedia table
  ☆19Updated 6 months ago
• SmritiChawla / Precily
  ☆31Updated 2 years ago
• QSong-github / scGCN
  scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics
  ☆40Updated 2 years ago
• theislab / regvelo
  inferring regulatory cellular dynamics
  ☆48Updated last week
• Durenlab / LINGER
  ☆108Updated last month
• yjgeno / GenKI
  ☆15Updated last year
• zhouzilu / cTPnet
  cTPnet Package
  ☆25Updated 3 years ago
• JinmiaoChenLab / ezSingleCell2
  ☆56Updated last year
• zakieh-tayyebi / CellSpace
  Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace
  ☆41Updated 6 months ago
• Teichlab / HCA_Heart_ver2
  ☆37Updated 2 years ago
• data2intelligence / SpaCET
  Spatial Cellular Estimator for Tumors
  ☆53Updated last month
• QiuyuLian / CITE-sort
  ☆17Updated 3 years ago
• theislab / scArches-reproducibility
  Reproducing result from the paper
  ☆34Updated 4 years ago
• jsxlei / SCALEX
  Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space
  ☆79Updated last month
• DongqingSun96 / TISCH
  Tumor Immune Single-cell Hub
  ☆21Updated 4 years ago