☆18Jul 30, 2022Updated 3 years ago
Alternatives and similar repositories for sciPENN
Users that are interested in sciPENN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Jun 17, 2024Updated last year
- ☆54Mar 4, 2025Updated last year
- PyTorch implementation of the MIDAS algorithm for single-cell multimodal data integration (Nature Biotechnology 2024).☆66Updated this week
- Interactive visualisation of CellphoneDB results☆12Jan 15, 2025Updated last year
- Multi-omics data analysis for rare population inference using single-cell graph transformer☆23Nov 5, 2025Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Mar 1, 2023Updated 3 years ago
- Reusability report of scBERT☆15Jul 14, 2024Updated last year
- Portable database of microhaplotype marker and allele frequency data☆11Oct 2, 2025Updated 7 months ago
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆33Jul 9, 2025Updated 9 months ago
- pytorch dataloaders for single-cell perturbation data☆44Apr 24, 2026Updated last week
- cTPnet Package☆27Jul 12, 2022Updated 3 years ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆22Mar 18, 2025Updated last year
- ☆19Mar 12, 2024Updated 2 years ago
- ☆18Sep 13, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆15Dec 18, 2024Updated last year
- ☆17Jan 8, 2024Updated 2 years ago
- scType goes spatial: ScType enables fast and accurate cell type identification from spatial transcriptomics data☆11Jul 11, 2024Updated last year
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Jan 12, 2024Updated 2 years ago
- Graph-linked unified embedding for single-cell multi-omics data integration☆464Feb 9, 2026Updated 2 months ago
- ☆18Jul 31, 2021Updated 4 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Dec 21, 2021Updated 4 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆21Aug 9, 2022Updated 3 years ago
- Automatic selection of number of principal components☆17Jun 27, 2022Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆33Nov 9, 2022Updated 3 years ago
- ☆33Feb 21, 2024Updated 2 years ago
- ☆63Aug 26, 2025Updated 8 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆83Jun 9, 2022Updated 3 years ago