paula-tataru / polyDFELinks
predicting DFE and alpha from polymorphism data
☆28Updated 6 years ago
Alternatives and similar repositories for polyDFE
Users that are interested in polyDFE are comparing it to the libraries listed below
Sorting:
- Infer demographic history with the Moran model☆48Updated 3 months ago
- Graph-aware Retrieval of Selective Sweeps☆22Updated last year
- Tools and Utilities for msmc and msmc2☆48Updated last month
- ☆31Updated 2 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated last year
- ☆24Updated 8 years ago
- Likelihood-based Selective Sweep Detection☆40Updated last year
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Updated 6 months ago
- ☆13Updated 4 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Ancestry_HMM-S is program designed to infer adaptive introgression from population genomic data☆19Updated last year
- ☆43Updated 3 months ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆51Updated 2 months ago
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆35Updated 4 years ago
- Sampling and inference of genealogies with recombination☆39Updated 2 months ago
- Tools for inference of the DFE with dadi☆14Updated 4 years ago
- Topology weighting from unphased genotypes of any ploidy☆15Updated last month
- ☆25Updated last year
- Tutorial on using popular tools for learning about population history☆51Updated 7 years ago
- GONE: Scripts, programs and an example data set☆46Updated last month
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 7 months ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆27Updated 7 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- ☆32Updated 4 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Software for detecting introgression using supervised machine learning☆21Updated 2 years ago
- ☆52Updated 3 months ago
- Convergent substitution detection tool based on the PCOC model☆31Updated 3 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆37Updated last year