This is the complete code base used in Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, and Bas E. Dutilh (2015) Computational approaches to predict bacteriophage–host relationships. FEMS Microbiology Reviews doi: 10.1093/femsre/fuv048
☆17Nov 7, 2021Updated 4 years ago
Alternatives and similar repositories for PhageHosts
Users that are interested in PhageHosts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 4 years ago
- VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison☆32Jul 28, 2018Updated 7 years ago
- Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). P…☆12Jan 8, 2021Updated 5 years ago
- VIDHOP is a virus host predicting tool. Its able to predict influenza A virus, rabies lyssavirus and rotavirus A.☆23May 7, 2023Updated 3 years ago
- ☆18Apr 6, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- viral Host UnveiLing Kit (vHULK)☆15May 15, 2025Updated last year
- VirHostMatcher-Net: A network-based computational tool for predicting virus-host interactions.☆19Mar 8, 2026Updated 4 months ago
- A tool to measure bacteriophages plaque sizes☆17May 12, 2023Updated 3 years ago
- Predict prokaryotic host for phage metagenomic sequences☆56Sep 17, 2024Updated last year
- Phage-Host Interaction Search Tool☆33Jul 8, 2024Updated 2 years ago
- PHANOTATE: a gene caller for phages.☆92Dec 2, 2024Updated last year
- Points of Significance: Adding realism to the SIR model for infectious disease epidemics☆13Nov 30, 2021Updated 4 years ago
- Published in PLOS ONE. Phage-host interaction prediction tool that uses protein language models to represent the receptor-binding protein…☆17Jul 13, 2025Updated last year
- ☆11Jul 5, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- DEPRECATED: Use Cenote-Taker 3 instead☆14Jan 19, 2024Updated 2 years ago
- Points of Significance: Modeling infectious epidemics☆12Oct 31, 2024Updated last year
- Python package for phage-host interaction prediction☆15Updated this week
- SpacePHARER CRISPR Spacer Phage-Host pAiRs findER☆48May 8, 2024Updated 2 years ago
- R package to work with ctDNA sequencing data☆47Feb 20, 2022Updated 4 years ago
- 石蒜摇摇乐vscode插件☆13Aug 31, 2022Updated 3 years ago
- Pairwise machine learning models for phage-host interaction prediction☆22Jun 23, 2024Updated 2 years ago
- Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)☆56Jan 19, 2024Updated 2 years ago
- rspatial website using terra☆13Jun 7, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Resources for the Online Multimedia Lecture at LMU Munich☆14Feb 13, 2022Updated 4 years ago
- The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)☆17Oct 12, 2018Updated 7 years ago
- TWRP Device tree for Poco X2 aka redmi k30☆10Dec 24, 2023Updated 2 years ago
- Deep learning multi-label classifier of non-coding DNA sequences☆11Mar 3, 2020Updated 6 years ago
- Code for "A Novel Aspect-Guided Deep Transition Model for Aspect Based Sentiment Analysis." on EMNLP 2019.☆21Dec 22, 2019Updated 6 years ago
- 2024深圳大学毕业论文latex模版☆16Feb 19, 2024Updated 2 years ago
- Mod for Don't Starve Together☆16Aug 6, 2025Updated 11 months ago
- Script to download FASTA chromosome sequences from UCSC and combine them in one single FASTA file☆16Apr 24, 2018Updated 8 years ago
- This is a summer training course at CCIC (Faculty of Computers and Information), Mansoura University, Egypt.☆22Apr 25, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Self-Drive Machine Learning Projects☆13Jul 19, 2021Updated 5 years ago
- WebUI自动化测试:Python+Selenium+PO模式+Pytest+Allure☆19Sep 3, 2021Updated 4 years ago
- Display utilities for phylogenetic trees and networks☆22Updated this week
- Pytorch implementation of Get To The Point: Summarization with Pointer-Generator Networks (2017) by Abigail See et al.☆15May 16, 2020Updated 6 years ago
- ☆20Nov 17, 2022Updated 3 years ago
- Viral protein family functional prediction using protein language models☆23Jan 6, 2026Updated 6 months ago
- siyuan-plugin-picture-library☆13Dec 2, 2025Updated 7 months ago