A FUSE filesystem to browse & edit FASTA files
☆21Oct 18, 2024Updated last year
Alternatives and similar repositories for fusta
Users that are interested in fusta are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bitpacked sequence trait and implementation☆19Feb 27, 2026Updated 4 months ago
- Variant call verification☆18May 12, 2025Updated last year
- ☆11Jul 3, 2022Updated 4 years ago
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- Rust bindings to minimap2 library☆113May 3, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- k-mers and the like☆23Updated this week
- ☆13Jun 15, 2024Updated 2 years ago
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆56Feb 6, 2024Updated 2 years ago
- A tool for identifying active prophage elements through read mapping☆13Oct 9, 2023Updated 2 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- Generate random test data for bioinformatics☆27Jun 17, 2024Updated 2 years ago
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆43May 21, 2026Updated last month
- A tool to measure bacteriophages plaque sizes☆17May 12, 2023Updated 3 years ago
- Analysis tool for NG-Capture-C, Tri-C and Tiled-C data☆10Jun 10, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pipeline to calculate icSHAPE score in genome with sliding window strategy☆13Aug 23, 2022Updated 3 years ago
- Quickly generate consensus assemblies for bacterial genomes☆14Sep 12, 2025Updated 9 months ago
- population and community dynamics on spatial graphs, in julia.☆24May 21, 2025Updated last year
- Rapidly extract reads from FASTX files based on taxonomic classification via Kraken2.☆15Jun 17, 2026Updated 3 weeks ago
- Snakemake workflow for scoring and comparing multiple bacterial genome assemblies (Illumina, Nanopore) to reference genome(s).☆28May 7, 2026Updated 2 months ago
- A SIMD-accelerated library to compute random minimizers☆46Apr 6, 2026Updated 3 months ago
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 3 years ago
- TreeKnit is a package that infers Ancestral Reassortment Graphs for segmented genomes (typically, human influenza).☆14Feb 18, 2025Updated last year
- Automated processing of Sanger sequencing data, taxonomic profiling, and generation of microbial strain libraries☆16Jan 4, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 7 months ago
- Host depletion optimised for clinical metagenomic sequencing applications☆18May 18, 2026Updated last month
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 4 months ago
- Truncate strings in a human-friendly way.☆14Dec 5, 2021Updated 4 years ago
- IgSimulator is a versatile tool for simulation of immunoglobulin repertoire☆12Nov 25, 2016Updated 9 years ago
- Tool to parse fasterq/fastq dump outputs for SRA scRNAseq data☆19Mar 7, 2024Updated 2 years ago
- A toolkit to debug and visualize local AWS step functions☆15Oct 3, 2023Updated 2 years ago
- Gene Absence Presence Identification tool.☆27Mar 28, 2025Updated last year
- This is the official site for JASPER (Jellyfish based Assembly Sequence Polisher for Error Reduction)☆12Jun 27, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bookmark directories for easy directory-hopping in the terminal☆13Sep 10, 2025Updated 9 months ago
- A genome-scale, fast, and precise segmental duplications mapping tool☆36Sep 11, 2024Updated last year
- The gview wiki migrated to GitHub.☆12Sep 3, 2020Updated 5 years ago
- ☆38Jan 12, 2026Updated 5 months ago
- Strain-level haplotyping for metagenomes with short or long-reads.☆69Apr 10, 2025Updated last year
- scripts for microbiome analysis☆12Jul 25, 2024Updated last year
- Course materials for an introduction to SARS-CoV-2 sequencing data analysis☆14Aug 15, 2024Updated last year