Alternatives and similar repositories for fusta

Users that are interested in fusta are comparing it to the libraries listed below

• jguhlin / minimap2-rs
  Rust bindings to minimap2 library
  ☆105Updated 3 weeks ago
• algbio / ggcat
  Compacted and colored de Bruijn graph construction and querying
  ☆91Updated last month
• natir / biotest
  Generate random test data for bioinformatics
  ☆27Updated last year
• lskatz / fasten
  Fasten toolkit, for streaming operations on fastq files
  ☆81Updated 2 months ago
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆47Updated last year
• jeff-k / bio-seq
  Bit-packed and well-typed biological sequences
  ☆37Updated 2 months ago
• rchikhi / rust-alignbench
  Pairwise nucleotide alignment benchmark of Rust bindings
  ☆30Updated 2 years ago
• noamteyssier / paraseq
  A minimal copy fastq and fasta reader built for parallel support and paired end processing
  ☆39Updated 3 weeks ago
• mbhall88 / ssubmit
  Submit slurm sbatch jobs without a script
  ☆73Updated 5 months ago
• mrvollger / rustybam
  bioinformatics toolkit in rust
  ☆93Updated 3 months ago
• HudsonAlpha / fmlrc2
  ☆49Updated 2 years ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆81Updated 9 months ago
• jguhlin / sfasta
  sfasta
  ☆35Updated 8 months ago
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆35Updated 4 months ago
• noamteyssier / gia
  gia: Genomic Interval Arithmetic
  ☆65Updated last year
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆20Updated 2 years ago
• alejandrogzi / gxf2bed
  fastest GTF/GFF-to-BED converter chilling around
  ☆30Updated last week
• rust-seq / minimizer-iter
  Iterate over minimizers of a DNA sequence
  ☆31Updated last year
• bede / deacon
  Fast DNA search and [host] depletion using minimizers
  ☆96Updated last month
• fulcrumgenomics / fqgrep
  Grep for FASTQ files
  ☆103Updated 3 weeks ago
• TravisWheelerLab / nail
  Nail is an Alignment Inference tooL
  ☆54Updated this week
• RagnarGrootKoerkamp / simd-sketch
  Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate.
  ☆20Updated last month
• fastqc-rs / fastqc-rs
  A quality control tool for FASTQ files written in rust
  ☆52Updated 6 months ago
• pangenome / impg
  implicit pangenome graph
  ☆86Updated last week
• wdecoster / kyber
  ☆21Updated last year
• TianyiShi2001 / bioinformatics-algorithms-rs
  Bioinformatics Algorithms implemented in Rust for Learners
  ☆31Updated 4 years ago
• tlemane / kmtricks
  modular k-mer count matrix and Bloom filter construction for large read collections
  ☆85Updated 3 weeks ago
• suchapalaver / krust
  Bioinformatics 101 tool for counting unique k-length substrings in DNA
  ☆33Updated 2 years ago
• brentp / vcfexpress
  expressions on VCFs
  ☆88Updated 8 months ago
• alignoth / alignoth
  Creating alignment plots from bam files
  ☆81Updated last week