Unleash the full power of your k-mers!
☆24Jan 13, 2026Updated 3 months ago
Alternatives and similar repositories for KPop
Users that are interested in KPop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Jan 21, 2022Updated 4 years ago
- Development repo for pyani-plus (the next iteration of pyani)☆30Apr 7, 2026Updated last week
- A software for gap filling in genome assemblies☆10Aug 12, 2022Updated 3 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated last month
- Primer design from single genes to whole gene families for unlocking the tree of life☆16Jun 4, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Oct 14, 2023Updated 2 years ago
- Taxonomy classification of viral sequences / contigs☆12Jul 15, 2025Updated 9 months ago
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated last year
- A Nextflow pipeline designed to classify, align and assemble nanopore metagenomic reads.☆17Mar 18, 2025Updated last year
- Bayesian inference of ancestral dates on bacterial phylogenetic trees☆97Dec 9, 2025Updated 4 months ago
- MetagenOmic read Re-Assigner and abundance quantifier☆20Jan 31, 2025Updated last year
- Bifrost graph gene caller.☆98Mar 29, 2026Updated 2 weeks ago
- ☆17May 13, 2025Updated 11 months ago
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆35Dec 4, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- BEAV: Bacterial Element Annotation reVamped☆76Aug 21, 2025Updated 7 months ago
- VarSkip multiplex PCR designs for SARS-CoV-2 sequencing☆14Jun 14, 2022Updated 3 years ago
- Repo for PrimerSchemes☆17Mar 31, 2026Updated 2 weeks ago
- Ultra-rapid detection of viral variants directly from sequencing data☆38Feb 17, 2026Updated last month
- ☆72Mar 10, 2024Updated 2 years ago
- ☆11Jul 3, 2022Updated 3 years ago
- Fast and space-efficient taxonomic classification of long reads☆45Aug 25, 2025Updated 7 months ago
- A tool to measure bacteriophages plaque sizes☆18May 12, 2023Updated 2 years ago
- k-mers and the like☆22Apr 6, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- treeWAS: A Phylogenetic Tree-Based Tool for Genome-Wide Association Studies in Microbes☆106Feb 6, 2025Updated last year
- DFAST Quality Control: Taxonomy and completeness check☆18Updated this week
- Taxonomic classifier for sequencing reads (bulk and single-cell data, short and long read) using FM-index with run-block compressed BWT.☆88Apr 2, 2026Updated last week
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆57Mar 27, 2026Updated 2 weeks ago
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆23Aug 14, 2025Updated 8 months ago
- ☆25Jun 20, 2023Updated 2 years ago
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆19Nov 29, 2023Updated 2 years ago
- Detecting multi-genome synteny using minimizer graph mapping☆106Apr 2, 2026Updated last week
- Microbial agile accurate SNP Typer☆30Dec 27, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- PG-SCUnK mesure quality of Pan-Genome Graphs using Single Copy and Universal k-mers☆23Feb 16, 2026Updated 2 months ago
- Split k-mer analysis – version 2☆105Updated this week
- TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomi…☆66Apr 8, 2026Updated last week
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆20Nov 15, 2022Updated 3 years ago
- ☆20Apr 24, 2025Updated 11 months ago
- Virus Protein Family tools☆31Jul 20, 2022Updated 3 years ago
- Web app for converting between physical layout formats for ZMK Studio☆12Dec 9, 2025Updated 4 months ago