waldronlab / MultiAssayExperiment
Bioconductor package for management of multi-assay data
☆72Updated last week
Alternatives and similar repositories for MultiAssayExperiment:
Users that are interested in MultiAssayExperiment are comparing it to the libraries listed below
- Clone of the Bioconductor repository for the basilisk package.☆27Updated last week
- Visualize Cytometry data with ggplot2☆59Updated last year
- Devel repository for minfi☆60Updated last year
- Glimma R package☆50Updated 8 months ago
- Explore design matrices interactively with R/Shiny☆37Updated 2 weeks ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆62Updated 3 months ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 5 months ago
- MSigDB gene sets for multiple organisms in a tidy data format☆75Updated last week
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆36Updated 2 years ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆90Updated 4 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated last week
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 4 months ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆78Updated this week
- Identify and correct invalid gene symbols☆58Updated 5 months ago
- A container (S4 class) for matrix-like assays☆35Updated last week
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- Representation and manipulation of genomic intervals☆45Updated 2 weeks ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆45Updated 5 months ago
- Interactive Cytometry Data Analysis☆65Updated last month
- Automate package and project setup for Bioconductor packages☆53Updated last month
- Brings SummarizedExperiment to the tidyverse☆26Updated 11 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆20Updated last year
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 4 months ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆22Updated last week
- DEAPP shiny App☆30Updated 2 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago