waldronlab / MultiAssayExperimentLinks
Bioconductor package for management of multi-assay data
☆72Updated 2 months ago
Alternatives and similar repositories for MultiAssayExperiment
Users that are interested in MultiAssayExperiment are comparing it to the libraries listed below
Sorting:
- MSigDB gene sets for multiple organisms in a tidy data format☆79Updated last week
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 3 months ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆90Updated 4 years ago
- Glimma R package☆50Updated 10 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆64Updated 3 weeks ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆78Updated 2 months ago
- Devel repository for minfi☆61Updated last year
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated 2 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Visualize Cytometry data with ggplot2☆59Updated last week
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last month
- Representation and manipulation of genomic intervals☆46Updated 3 weeks ago
- Project Website:☆54Updated 3 weeks ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 8 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Functional enrichment analysis of high-throughput omics data☆20Updated 6 months ago
- Identify and correct invalid gene symbols☆58Updated 8 months ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 8 months ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆21Updated 2 weeks ago
- Grid and ggplot2 based visualization for biological data☆113Updated last year
- A General Framework for Consensus Partitioning☆62Updated 5 months ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 2 years ago
- Brings SummarizedExperiment to the tidyverse☆26Updated last year
- DESeq2 or edgeR☆22Updated 8 years ago