Code accompanying the manuscript "Broad transcriptomic dysregulation across the cerebral cortex in ASD".
☆13Aug 10, 2022Updated 3 years ago
Alternatives and similar repositories for Broad-transcriptomic-dysregulation-across-the-cerebral-cortex-in-ASD
Users that are interested in Broad-transcriptomic-dysregulation-across-the-cerebral-cortex-in-ASD are comparing it to the libraries listed below
Sorting:
- Scripts used to generate the data/figures contained in "Single Cell Transcriptomics Reveals Cell Type Specific Diversification in Human H…☆13Mar 10, 2023Updated 2 years ago
- Whole genome workflows☆12Nov 9, 2024Updated last year
- CellRank 2's reproducibility repository.☆15Sep 4, 2024Updated last year
- ☆12Nov 20, 2023Updated 2 years ago
- ☆10Dec 11, 2024Updated last year
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Aug 8, 2023Updated 2 years ago
- Code and data sharing of Liu et al. 2023 manuscript☆16Apr 18, 2023Updated 2 years ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 4 months ago
- ☆18Feb 18, 2021Updated 5 years ago
- ☆13Jan 24, 2024Updated 2 years ago
- End-to-end pipeline for segmenting cell nuclei on histology slides☆16Jul 19, 2022Updated 3 years ago
- Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis☆13Oct 31, 2023Updated 2 years ago
- Trends in single cell papers☆17Sep 23, 2024Updated last year
- R tools for analysis and visualization of single-cell subclustering data☆17Sep 9, 2025Updated 6 months ago
- Spatial omics analysis toolbox☆19Jul 12, 2024Updated last year
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- Toolbox of the Human Neural Organoid Cell Atlas☆30Mar 2, 2026Updated last week
- A toolkit for analyzing architectural stripes☆20Dec 1, 2024Updated last year
- Analysis pipeline for CUT&TAG data☆23Sep 2, 2020Updated 5 years ago
- ☆26Apr 9, 2025Updated 11 months ago
- MERFISH decoding software☆26Aug 16, 2025Updated 6 months ago
- Code for the "Spatial genomics maps the structure, nature and evolution of cancer clones" paper☆27Nov 21, 2022Updated 3 years ago
- Tutorial for AMSI BioInfoSummer 2018☆29Dec 3, 2018Updated 7 years ago
- ☆21May 6, 2025Updated 10 months ago
- Detection and classification selective sweep use domain adaptive model☆10Apr 29, 2024Updated last year
- Automated processing of Sanger sequencing data, taxonomic profiling, and generation of microbial strain libraries☆12Jan 4, 2026Updated 2 months ago
- ☆40Jul 14, 2023Updated 2 years ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- ☆10May 31, 2022Updated 3 years ago
- Analysis from kallisto paper☆32Feb 10, 2016Updated 10 years ago
- ☆14Oct 17, 2024Updated last year
- ☆34Apr 8, 2023Updated 2 years ago
- ☆11Feb 2, 2026Updated last month
- iterative clustering pipeline of big single cell datasets.☆36Sep 5, 2025Updated 6 months ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Aug 10, 2023Updated 2 years ago
- Repository containing notebooks and scripts associated with spatiotemporal profiling and modeling of brain across adult life☆49Apr 9, 2025Updated 11 months ago
- ☆45Jun 27, 2023Updated 2 years ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Feb 8, 2026Updated last month
- Explore the Hi-Cs☆11Nov 30, 2025Updated 3 months ago