dcadam / covid-19-sse

Related projects ⓘ

Alternatives and complementary repositories for covid-19-sse

• ryanpeek / aggiedown
  An R Markdown template using the bookdown package for preparing a PhD thesis at the University of California Davis
  ☆16Updated 11 months ago
• sdwfrost / mevr-course-2016
  Molecular Epidemiology of Viruses in R
  ☆18Updated 9 years ago
• sahirbhatnagar / ggmix
  ☆10Updated 3 years ago
• ropensci / taxonomy
  taxonomy R packages
  ☆44Updated 7 months ago
• talgalili / gplots
  ☆13Updated last month
• ropensci / brranching
  I can haz all the phylogenies
  ☆18Updated last year
• ropensci / taxizedb
  Tools for Working with Taxonomic SQL Databases
  ☆30Updated 5 months ago
• rudeboybert / SpatialEpi
  R Package of methods and data for spatial epidemiology
  ☆30Updated last year
• caijun / res4flu
  Resources for Influenza Research
  ☆23Updated 2 years ago
• andysouth / rworldmap
  R package for mapping country data
  ☆29Updated last year
• USAID-OHA-SI / coRps
  ☆11Updated 3 weeks ago
• teunbrand / ggchromatic
  Colour and fill scales for 'ggplot2' using colour spaces.
  ☆11Updated 3 years ago
• Bioconductor / S4Vectors
  Foundation of vector-like and list-like containers in Bioconductor
  ☆18Updated last week
• KlausVigo / tanggle
  phylogenetic networks using ggplot2 and ggtree
  ☆11Updated 2 years ago
• seandavi / sars2pack
  An R package with over 50 highly cited, read-to-use, up-to-date COVID-19 pandemic data resources
  ☆59Updated 2 years ago
• ropensci / taxa
  taxonomic classes for R
  ☆48Updated 9 months ago
• audy / smalldata
  Small(-ish) datasets for fun and teaching
  ☆17Updated 8 years ago
• trvrb / sismid
  Pathogen evolution, selection and immunity
  ☆47Updated 8 months ago
• reconhub / outbreaker2
  Disease outbreak reconstruction from epidemiological and genetic data
  ☆31Updated last month
• ahgroup / DSAIRM
  R Package - Dynamical Systems Approach to Immune Response Modeling
  ☆32Updated 4 months ago
• chgigot / epiphy
  Analyzing plant disease epidemics
  ☆15Updated 5 months ago
• viralemergence / clover
  Four-in-one value pack of host-virus association data
  ☆22Updated 2 years ago
• paternogbc / sensiPhy
  R package to perform sensitivity analysis for comparative methods
  ☆12Updated 4 years ago
• sdwfrost / epiwidgets
  A collection of htmlwidgets handy for epidemiology, etc.
  ☆13Updated 9 years ago
• trangdata / treeheatr
  Heatmap-integrated Decision Tree Visualizations
  ☆57Updated last year
• IndrajeetPatil / pairwiseComparisons
  Pairwise comparison tests for one-way designs 🔬📝
  ☆45Updated 2 years ago
• ropensci / rotl
  Interface to Open Tree of Life API
  ☆39Updated last year
• JohnsonHsieh / iNEXT
  R package for interpolation and extrapolation
  ☆57Updated 7 months ago
• tamminenlab / blaster
  BLAST-like algorithm for R based on the nsearch library (https://github.com/stevschmid/nsearch)
  ☆14Updated 8 months ago
• CenterForStatistics-UGent / RCM
  A model-based visualization method for microbiome data
  ☆16Updated last year