ImperialCardioGenetics / frequencyFilterLinks
Allele frequency filtering for Mendelian variant discovery
☆18Updated 9 years ago
Alternatives and similar repositories for frequencyFilter
Users that are interested in frequencyFilter are comparing it to the libraries listed below
Sorting:
- Allele frequency filter app☆14Updated 3 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated last week
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 5 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- Structural Variation breakpoint discovery via adaptive learning☆16Updated 2 years ago
- Reducing reference bias using multiple population reference genomes☆34Updated last year
- v2.x of the microassembly based somatic variant caller☆23Updated 6 months ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated last week
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated last month
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Updated 3 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 6 years ago
- ☆23Updated 2 months ago
- ☆13Updated 8 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 6 years ago
- Clinical Variant Annotation Pipeline☆10Updated 5 years ago
- ☆11Updated 2 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Updated 6 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆25Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Updated 6 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Updated 6 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Updated 7 years ago
- PopSTR - A Population based microsatellite genotyper☆32Updated 2 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Updated 6 years ago
- extract SV signal from a BAM☆11Updated 7 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 5 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated 2 years ago