ImperialCardioGenetics / frequencyFilter
Allele frequency filtering for Mendelian variant discovery
☆17Updated 8 years ago
Alternatives and similar repositories for frequencyFilter
Users that are interested in frequencyFilter are comparing it to the libraries listed below
Sorting:
- Allele frequency filter app☆14Updated 3 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated last month
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 3 months ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- Clinical Variant Annotation Pipeline☆10Updated 5 years ago
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆25Updated 4 years ago
- Tissue-specific variant annotation☆10Updated 6 years ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Updated 5 years ago
- ☆11Updated 6 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆16Updated last year
- BigWig manpulation tools using libBigWig and htslib☆29Updated 9 months ago
- extract SV signal from a BAM☆11Updated 6 years ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆10Updated 5 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- Nextflow implementation of the GATK HaplotypeCaller pipeline☆13Updated last month
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆17Updated 6 years ago
- ☆13Updated 7 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Pan gGnome Viewer☆10Updated last year
- Unfazed by genomic variant phasing☆26Updated 11 months ago
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Updated 6 years ago
- ☆21Updated last month
- ☆11Updated 2 years ago
- Structural Variation breakpoint discovery via adaptive learning☆15Updated last year