smped / ngsReports
☆22Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for ngsReports
- a set of NGS pipelines☆24Updated 3 weeks ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago
- ☆23Updated 3 years ago
- RNA-seq workflow: differential transcript usage☆20Updated last year
- A set of tools to annotate VCF files with expression and readcount data☆25Updated 2 months ago
- interactive plots for differential expression analysis☆25Updated 2 months ago
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 6 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆41Updated 2 years ago
- R package for DNA methylation analysis☆17Updated 3 months ago
- Filter and prioritize fusion calls☆20Updated last month
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 2 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 3 months ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated last year
- DRAGEN Tumor/Normal workflow post-processing