Examples on using EpiGraphDB
☆30Mar 22, 2021Updated 5 years ago
Alternatives and similar repositories for epigraphdb
Users that are interested in epigraphdb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.☆42Jul 3, 2021Updated 4 years ago
- An R package for Mendelian Randomization☆39Mar 27, 2024Updated 2 years ago
- https://jinghuazhao.github.io/pQTLtools/☆23Mar 25, 2025Updated last year
- phenoscanner allows users to query the PhenoScanner database of genotype-phenotype associations from inside R☆56Jul 18, 2022Updated 3 years ago
- PRS pipeline using PRS_CS☆15Oct 21, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆18Oct 15, 2021Updated 4 years ago
- Source code for the GWAS Diversity Monitor☆16Sep 1, 2025Updated 8 months ago
- ☆13Nov 30, 2018Updated 7 years ago
- Python interface to the MRC IEU OpenGWAS API☆15Mar 6, 2026Updated last month
- Analysis workflow for MRC-IEU PhD mini-project on childhood BMI effect on breast cancer☆89Mar 31, 2024Updated 2 years ago
- MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship☆11May 14, 2024Updated last year
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- ☆36Updated this week
- Linking GWAS data to analytical tools in R☆156May 20, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Specification for the GWAS-VCF format (manuscript in preparation)☆26Aug 3, 2021Updated 4 years ago
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆12Jan 15, 2021Updated 5 years ago
- ☆12Jun 18, 2024Updated last year
- R package for performing 2-sample MR using IEU OpenGWAS database☆541Apr 2, 2026Updated last month
- An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…☆33Oct 4, 2022Updated 3 years ago
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- Integrating influenza antigenic dynamics with molecular evolution☆12May 28, 2015Updated 10 years ago
- Codes for our NPNT paper at Nature Metabolism☆16Feb 9, 2024Updated 2 years ago
- Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…☆11Jul 13, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆12May 14, 2024Updated last year
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- ☆13Mar 17, 2019Updated 7 years ago
- R package for epigraphdb☆29Jul 6, 2024Updated last year
- Binaries for tools used in genetics in an R package☆12Apr 7, 2025Updated last year
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆19Nov 18, 2025Updated 5 months ago
- Core pipeline of GenoML☆16Aug 3, 2020Updated 5 years ago
- ☆22Apr 28, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Library for indexing VCF files for random access searches by rsID☆17Mar 2, 2026Updated last month
- A Linear Discriminant Analysis Effect Size (LEfSe) wrapper.☆26Feb 2, 2017Updated 9 years ago
- Machine Learning to Detect Cancer Biomarkers from RNAseq Data☆36Aug 9, 2019Updated 6 years ago
- Convert GWAS summary statistics to VCF☆48Apr 13, 2026Updated 2 weeks ago
- ☆10May 31, 2022Updated 3 years ago
- Library and command line scripts for fitting heteroskedastic linear mixed models to genetic data. Can be used to perform GWAS for genetic…☆19Sep 13, 2018Updated 7 years ago
- Senescent Cell Identification☆52Feb 22, 2024Updated 2 years ago