faster haplotype-based admixture inference and dating software
☆12Nov 25, 2025Updated 11 months ago
Alternatives and similar repositories for fastGLOBETROTTER
Users that are interested in fastGLOBETROTTER are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software for inferring coalescence rates for unphased, low-coverage genomes☆11Jun 11, 2025Updated last year
- ☆13Jul 16, 2026Updated 3 months ago
- Two locus likelihoods and ARGs under changing population size☆14Dec 18, 2025Updated 10 months ago
- A set of tools for modelling ancestry patterns along the genome.☆24Updated this week
- A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests and viral simulations at scale. Related manuscr…☆16Apr 12, 2026Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Fast population genetics clustering.☆37Updated this week
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆31Sep 27, 2019Updated 7 years ago
- cobraa (coalescent based reconstruction of ancient admixture): a hidden Markov model to infer ghost admixture using just a diploid sequen…☆26Jun 17, 2025Updated last year
- Fast inference of fine-scale recombination rates based on fused-LASSO☆63Feb 10, 2026Updated 8 months ago
- Software for estimating genome-wide genealogies for thousands of samples☆49May 19, 2026Updated 5 months ago
- Tool to merge VCF genotype files at scale☆12Feb 2, 2024Updated 2 years ago
- PHasing Reads in Areas Of Homozygosity☆14Feb 12, 2025Updated last year
- Hybridization detection using phylogenetic invariants☆54Oct 29, 2024Updated 2 years ago
- Here we present a method to plot the outputs of RFMIX version 2☆32Jul 1, 2026Updated 4 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- R package for handling Relate output files☆10Feb 3, 2022Updated 4 years ago
- Methylatino phasing using PacBio CCS reads☆14Dec 13, 2024Updated last year
- AncestralPaths is a local ancestry painting technique based on genealogies produced by RELATE. The method aims to assign 'path' ancestrie…☆11Jun 29, 2023Updated 3 years ago
- Interactive tool for investigating coverage gaps in eDNA metabarcoding reference databases for marine, freshwater, and elasmobranch fis…☆10Mar 9, 2026Updated 7 months ago
- FastSMC is a method to quickly and accurately estimate pairwise identical-by-descent (IBD) regions in the genome. FastSMC estimates the a…☆15Sep 2, 2021Updated 5 years ago
- defiNETti is a program for performing Bayesian inference on exchangeable (or permutation-invariant) data via deep learning. In particula…☆20Apr 10, 2018Updated 8 years ago
- Work for the tree sequence inference paper.☆24Oct 19, 2020Updated 6 years ago
- ☆12Nov 23, 2020Updated 5 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Apr 12, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An R package to detect, classify, and visualize genome rearrangements☆15Aug 4, 2020Updated 6 years ago
- LASSI-Plus: A program to calculate haplotype frequency spectrum statistics☆13Sep 29, 2026Updated last month
- R package for creating plots☆11Jan 17, 2026Updated 9 months ago
- Population Genomics in R workshop☆13Mar 24, 2024Updated 2 years ago
- Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)☆12May 22, 2025Updated last year
- Tools and Utilities for msmc and msmc2☆51Jan 23, 2026Updated 9 months ago
- Heuristic, parsimony-based ancestral recombination graph inference☆17Aug 25, 2021Updated 5 years ago
- Infer demographic history with the Moran model☆52Jun 14, 2025Updated last year
- ☆15Nov 22, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆43Nov 15, 2023Updated 2 years ago
- ☆14Oct 26, 2017Updated 9 years ago
- Creates a simple OTU table from Kraken2 report.☆13Oct 15, 2024Updated 2 years ago
- Interactive visualization method for ancestral recombination graphs☆22Oct 21, 2026Updated last week
- Parsimony on tree sequences☆13Jun 27, 2025Updated last year
- ☆14Mar 7, 2021Updated 5 years ago
- SNP genotyping in polyploids☆17Aug 12, 2020Updated 6 years ago