csoneson / treeclimbRLinks
☆20Updated 3 months ago
Alternatives and similar repositories for treeclimbR
Users that are interested in treeclimbR are comparing it to the libraries listed below
Sorting:
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆14Updated 6 months ago
- R interface to 'Gos'☆39Updated 2 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 2 months ago
- Explore design matrices interactively with R/Shiny☆38Updated 3 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 2 months ago
- Demonstration of the use of an R package to organize a data analysis project☆22Updated 5 years ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 8 months ago
- TOP results by CONfident efFECT Sizes.☆15Updated last year
- countsimQC - Compare characteristic features of count data sets☆30Updated this week
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆13Updated 6 years ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆45Updated last month
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Representation and manipulation of genomic intervals☆46Updated 2 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated 2 years ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated last year
- A Grammar of Data Manipulation for Omics Data☆21Updated 5 years ago
- Genomic plot in trellis layout☆42Updated last week
- An introduction to matrix factorization and PCA and SVD.☆41Updated 2 years ago
- ☆10Updated 6 years ago
- Course website for Genomic Data Visualization 2024☆26Updated last year
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆27Updated 3 months ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- Gene-level general linear mixed model☆24Updated 4 months ago
- ☆28Updated last year
- Differential expression and allelic analysis, nonparametric statistics☆30Updated last year
- Brings SummarizedExperiment to the tidyverse☆29Updated last month
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago