greenelab / cccLinks
☆23Updated 7 months ago
Alternatives and similar repositories for ccc
Users that are interested in ccc are comparing it to the libraries listed below
Sorting:
- scover☆23Updated last year
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 8 years ago
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- ☆22Updated last year
- post-clustering differential expression test☆35Updated 6 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- ☆17Updated last year
- R package for gene selection using k-NN graphs.☆13Updated 2 years ago
- Exon-Intron Split Analysis (EISA) in R☆16Updated 3 months ago
- ☆35Updated 5 months ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆50Updated last year
- kallisto index tag extractor☆20Updated 6 years ago
- ☆28Updated 6 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆34Updated 3 years ago
- Reconstruction of higher order chromatin from scRNA-seq and scATAC-seq☆14Updated 3 weeks ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 4 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated last week
- ☆62Updated 5 months ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- processes GoT amplicon data and generates a table of metrics☆31Updated 3 years ago
- Code related to scRNA analysis using the scAmpi workflow☆27Updated 2 months ago
- ☆44Updated 9 months ago