☆24Mar 4, 2026Updated last month
Alternatives and similar repositories for ccc
Users that are interested in ccc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A clusterability measure for scRNA-seq data.☆19Feb 2, 2022Updated 4 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆14Aug 22, 2017Updated 8 years ago
- Code for RNA-seq gene coexpression analysis☆10Dec 23, 2021Updated 4 years ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆14Apr 8, 2026Updated 3 weeks ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆34Aug 1, 2024Updated last year
- Cross Modality Optimal Transport for multimodal inference☆10Nov 29, 2024Updated last year
- A R package for Grade of Membership model and Visualization of counts data:☆33Jan 15, 2021Updated 5 years ago
- ☆20Updated this week
- ☆14Aug 30, 2025Updated 8 months ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Jun 13, 2022Updated 3 years ago
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 4 months ago
- post-clustering differential expression test☆37May 28, 2019Updated 6 years ago
- Template for building a bioconductor workshop package using github actions☆23Apr 22, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A rust framework to make using alevin-fry even simpler☆64Apr 15, 2026Updated 2 weeks ago
- PhenoPLIER☆15Apr 8, 2024Updated 2 years ago
- Simulate pseudo-bulk RNAseq samples from scRNAseq expression data☆18Apr 6, 2026Updated 3 weeks ago
- Various Ideas for Confounder Adjustment in Regression☆24May 8, 2023Updated 2 years ago
- Official implementation of Joint Multidimensional Scaling☆24Nov 19, 2023Updated 2 years ago
- Complex Heatmaps Using Base Graphics☆15Mar 29, 2026Updated last month
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆10Jul 21, 2025Updated 9 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆43Jul 12, 2021Updated 4 years ago
- ☆57Aug 11, 2022Updated 3 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Jul 5, 2019Updated 6 years ago
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 6 years ago
- Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.☆87Apr 21, 2026Updated last week
- Information-based dimensionality reduction☆29Dec 14, 2024Updated last year
- Junction centric alternative splicing translator☆22Oct 31, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Out-of-Core Principal Component Analysis☆19Dec 25, 2017Updated 8 years ago
- Genome Assembly 102☆18Apr 23, 2025Updated last year
- GENOT: Generative Neural Optimal Transport☆15Dec 18, 2024Updated last year
- simplified cellranger for long-read data☆21Aug 27, 2025Updated 8 months ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- Annotatability, a method to identify meaningful patterns in single-cell genomics data through annotation-trainability analysis, which est…☆19Jun 23, 2025Updated 10 months ago
- significance testing over interval overlaps☆30Jul 11, 2020Updated 5 years ago