marcottelab / protein_complex_maps_publicLinks
Public repository for building and analyzing protein complex maps
☆11Updated 8 years ago
Alternatives and similar repositories for protein_complex_maps_public
Users that are interested in protein_complex_maps_public are comparing it to the libraries listed below
Sorting:
- Code to run OncoSig Analyses☆18Updated 4 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆28Updated 2 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 7 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆24Updated 9 months ago
- Integration ribosome profiling - mass spectrometry☆15Updated 3 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- ☆17Updated last year
- Comprehensive Human Expressed SequenceS☆17Updated 10 months ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆16Updated 3 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Updated 11 months ago
- 🐶 hlabud: HLA genotype analysis in R☆16Updated last month
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 8 years ago
- ChIP-seq DC and QC Pipeline☆34Updated 4 years ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆19Updated 5 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆18Updated 4 months ago
- T cell Receptor and B cell Receptor assembly from single cell RNA sequencing data☆10Updated 7 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago