mblstamps / stamps2018
STAMPS 2018 course
☆16Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for stamps2018
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆35Updated 5 years ago
- ☆19Updated last year
- statdivlab's teaching materials for STAMPS @ the MBL in 2019☆12Updated 5 years ago
- A comprehensive and customizable R package for microbiome analysis.☆21Updated last year
- Linear Decomposition Model☆24Updated last year
- A model-based visualization method for microbiome data☆16Updated last year
- accessory functions for processing microbial community data☆12Updated last year
- An Amazing Shiny App☆17Updated 3 years ago
- ☆13Updated 4 years ago
- Workshop for NGS'18 conference, Barcelona 2018☆25Updated 5 years ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆29Updated last year
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆23Updated 4 months ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆14Updated 5 years ago
- Microbial community analysis tools in R☆20Updated 2 years ago
- power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA☆35Updated 8 years ago
- Species richness with high diversity☆68Updated 11 months ago
- Simple R utilities for working with HMMER☆18Updated last month
- tidyMicro GitHup Repository☆18Updated 3 years ago
- Ying's tools for analysis, with particular focus on microbiome data☆41Updated last week
- ggplots for nested data☆10Updated 4 months ago
- SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualiz…☆13Updated 9 months ago
- METAgenomic LONgitudinal Differential Abundance method☆16Updated 4 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Updated last year
- An interactive web application for demonstrating and using phyloseq.☆59Updated 5 years ago
- R interface to 'Gos'☆35Updated last year
- A Toolbox for Manipulating Biological Sequences in R☆20Updated 2 years ago
- This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…☆17Updated 11 months ago
- analysis of phylogenetics and evolution☆53Updated last week
- Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations☆14Updated 6 months ago
- This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions f…☆51Updated 5 months ago