mblstamps / stamps2018View external linksLinks
STAMPS 2018 course
☆15Aug 8, 2018Updated 7 years ago
Alternatives and similar repositories for stamps2018
Users that are interested in stamps2018 are comparing it to the libraries listed below
Sorting:
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆35Nov 8, 2019Updated 6 years ago
- Workshop for NGS'18 conference, Barcelona 2018☆24Nov 22, 2018Updated 7 years ago
- statdivlab's teaching materials for STAMPS @ the MBL in 2019☆11Jul 28, 2019Updated 6 years ago
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- Tools for analyzing trees☆13Apr 16, 2025Updated 10 months ago
- A pipeline for lightweight screening of Eukaryotic genomes and transcriptomes for recent HGT☆14Aug 26, 2025Updated 5 months ago
- ☆13Feb 6, 2020Updated 6 years ago
- workflows for offline analysis of 16S rRNA Nanopore data☆16Jun 13, 2023Updated 2 years ago
- MetaCRAST: reference-guided CRISPR detection in metagenomes☆14Mar 10, 2020Updated 5 years ago
- D3 based visualisation for comparative genomics☆15Oct 6, 2016Updated 9 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Apr 17, 2020Updated 5 years ago
- ☆16Jan 21, 2024Updated 2 years ago
- An awesome list of resources for reproducible research in R. Includes a table of comparison for different tools.☆16Dec 21, 2024Updated last year
- ☆19Jul 17, 2023Updated 2 years ago
- Various functions for analysis of microbial community data☆47Oct 1, 2025Updated 4 months ago
- A microbiome analysis toolkit for R☆25Aug 21, 2023Updated 2 years ago
- Tutorials and code for ISMB 2019 short course on Recent Advances in Statistical Methods and Computational Algorithms for Single-Cell Omic…☆41Jul 21, 2019Updated 6 years ago
- ☆19Jan 16, 2024Updated 2 years ago
- Metagenomics-related extended functionalities to samtools☆22Jul 6, 2023Updated 2 years ago
- Simple R utilities for working with HMMER☆19Oct 3, 2024Updated last year
- Linear Decomposition Model☆25Jun 16, 2023Updated 2 years ago
- ☆20Oct 29, 2025Updated 3 months ago
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆25Jan 15, 2026Updated last month
- This repository contains illustrations to explain concepts in data (science).☆23Jan 9, 2026Updated last month
- MEGARes and AmrPlusPlus - A comprehensive database of antimicrobial resistance genes and user-friendly pipeline for analysis of high-thro…☆26Nov 14, 2022Updated 3 years ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆24Jan 24, 2024Updated 2 years ago
- functions for analyzing phyloseq data☆28Feb 4, 2025Updated last year
- Short course on reproducible science: what, why, how☆22Jan 12, 2025Updated last year
- A package for creating and managing sample identifiers in comparative -omics datasets.☆23Jan 30, 2017Updated 9 years ago
- Count Regression for Correlated Observations with the Beta-binomial☆106Nov 13, 2025Updated 3 months ago
- Working with the outputs of sourmash in R☆28Jan 15, 2026Updated last month
- Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data☆26Jul 17, 2017Updated 8 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Sep 9, 2025Updated 5 months ago
- Repo for course Tools for complex data analysis☆11Jul 15, 2024Updated last year
- #TidyTuesday Contributions.☆31Aug 29, 2022Updated 3 years ago
- Functions for compositional analysis of high throughput sequencing☆29Dec 8, 2023Updated 2 years ago
- MAG Circularization Method☆32Nov 4, 2025Updated 3 months ago
- Bioinformatics Open Source Sequence machine☆32Aug 29, 2023Updated 2 years ago
- Data, scripts, and lectures for the Introduction to Metagenomics Summer Workshop 2019.☆35Jul 15, 2019Updated 6 years ago