cozygene / bisqueLinks
An R toolkit for estimation of cell composition from bulk expression data
☆81Updated 5 months ago
Alternatives and similar repositories for bisque
Users that are interested in bisque are comparing it to the libraries listed below
Sorting:
- ☆74Updated 2 years ago
- ☆55Updated 4 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆86Updated this week
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 11 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆123Updated 7 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 5 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 5 years ago
- ☆63Updated 5 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆63Updated 3 months ago
- Processing pipeline scripts for sci-RNA-seq3 (bash, R, python)☆44Updated 4 years ago
- Normalize CITEseq Data☆66Updated 3 weeks ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated 2 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆80Updated 8 months ago
- Single Cell Cluster Evaluation☆98Updated 4 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆73Updated 7 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆131Updated 4 months ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- ☆63Updated 6 years ago
- Mouse cell atlas☆61Updated 5 years ago
- Create stacked violin plot☆51Updated 3 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆65Updated 4 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- scWGCNA☆61Updated 3 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆81Updated 3 years ago
- Clone of the Bioconductor repository for the scran package.☆45Updated last year